Detail information of GWHGAAEX013331/evm.TU.scaffold_5.284


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG19472.00E-14Leucine rich repeat proteins, some proteins contain F-box
nrgi|743762188|ref|XP_010906889.1|8.98E-74PREDICTED: F-box/LRR-repeat protein At3g48880-like [Elaeis guineensis]
Swissprottr|Q9S9V9|FBL23_ARATH5.00E-15Putative F-box/LRR-repeat protein 23
trEMBLtr|M0SV03|M0SV03_MUSAM2.00E-72Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P02240_001}
TAIRAT4G055002.00E-14Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001665247006525603-
Transcript Sequence

Network for GWHGAAEX013331

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms30.490
SRR2545915Juvenile tuber32.340
SRP108465SRR5643513five period of Gastrodia elata72.820
SRR5643514five period of Gastrodia elata51.840
SRR5643515five period of Gastrodia elata50.490
SRR5643524five period of Gastrodia elata45.490
SRR5643525five period of Gastrodia elata46.470
SRR5643528five period of Gastrodia elata67.110
SRR5643658five period of Gastrodia elata41.390
SRR5643659five period of Gastrodia elata20.160
SRR5643660five period of Gastrodia elata27.690
SRR5643661five period of Gastrodia elata72.380
SRR5643662five period of Gastrodia elata23.690
SRR5643663five period of Gastrodia elata25.150
SRR5643664five period of Gastrodia elata20.200
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_166.290
SRR6049655Rhizomagastrodiae_C368-T10_good_168.820
SRR6049656Rhizomagastrodiae_C368-T07_good_1113.460
SRR6049657Rhizomagastrodiae_C368-T07_good_163.400
SRR6049658Rhizomagastrodiae_C368-T04_good_170.270
SRR6049659Rhizomagastrodiae_C368-T04_good_165.850
SRR6049660Rhizomagastrodiae_C368-T01_good_1110.260
SRR6049661Rhizomagastrodiae_C368-T04_good_1103.580
SRR6049662Rhizomagastrodiae_C368-T01_good_1109.750
SRR6049663Rhizomagastrodiae_C368-T01_good_1149.790
SRR6049664Rhizomagastrodiae_C368-T10_good_1138.220
SRR6049665Rhizomagastrodiae_C368-T10_good_1138.220
SRP279888GastroGastrodia elata tuber 59.87
JuvenJuvenile tuber410.50
Mother_GastroMother tuber of Gastrodia elata 360.85
Mother_JuvenMother tuber of Juvenile 397.22