Detail information of GWHGAAEX013333/evm.TU.scaffold_5.288


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG19472.00E-15Leucine rich repeat proteins, some proteins contain F-box
nrgi|743762188|ref|XP_010906889.1|8.44E-77PREDICTED: F-box/LRR-repeat protein At3g48880-like [Elaeis guineensis]
Swissprottr|Q9ZPE4|FBW2_ARATH5.00E-16F-box protein FBW2
trEMBLtr|M0SXD6|M0SXD6_MUSAM1.00E-73Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P10570_001}
TAIRAT4G089802.00E-15F-BOX WITH WD-40 2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001666818776682804+
Transcript Sequence

Network for GWHGAAEX013333

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00646.32F-box18500.002
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms47.630
SRR2545915Juvenile tuber199.270
SRP108465SRR5643513five period of Gastrodia elata70.070
SRR5643514five period of Gastrodia elata47.550
SRR5643515five period of Gastrodia elata79.440
SRR5643524five period of Gastrodia elata65.870
SRR5643525five period of Gastrodia elata38.420
SRR5643528five period of Gastrodia elata70.250
SRR5643658five period of Gastrodia elata43.600
SRR5643659five period of Gastrodia elata132.950
SRR5643660five period of Gastrodia elata244.150
SRR5643661five period of Gastrodia elata197.280
SRR5643662five period of Gastrodia elata260.400
SRR5643663five period of Gastrodia elata211.790
SRR5643664five period of Gastrodia elata123.730
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_125.480
SRR6049655Rhizomagastrodiae_C368-T10_good_131.540
SRR6049656Rhizomagastrodiae_C368-T07_good_139.650
SRR6049657Rhizomagastrodiae_C368-T07_good_124.000
SRR6049658Rhizomagastrodiae_C368-T04_good_130.930
SRR6049659Rhizomagastrodiae_C368-T04_good_117.030
SRR6049660Rhizomagastrodiae_C368-T01_good_118.700
SRR6049661Rhizomagastrodiae_C368-T04_good_130.740
SRR6049662Rhizomagastrodiae_C368-T01_good_129.880
SRR6049663Rhizomagastrodiae_C368-T01_good_116.180
SRR6049664Rhizomagastrodiae_C368-T10_good_153.580
SRR6049665Rhizomagastrodiae_C368-T10_good_153.580
SRP279888GastroGastrodia elata tuber 102.21
JuvenJuvenile tuber89.55
Mother_GastroMother tuber of Gastrodia elata 120.99
Mother_JuvenMother tuber of Juvenile 223.20