Detail information of GWHGAAEX013335/evm.TU.scaffold_5.291


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG19474.00E-22Leucine rich repeat proteins, some proteins contain F-box
nrgi|743762196|ref|XP_010906931.1|1.44E-86PREDICTED: F-box/LRR-repeat protein At3g48880-like [Elaeis guineensis]
Swissprottr|Q9M2Z5|FBL53_ARATH1.00E-22F-box/LRR-repeat protein At3g48880
trEMBLtr|M0TI51|M0TI51_MUSAM8.00E-84Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr7P16640_001}
TAIRAT3G488804.00E-22RNI-like superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001668333806834566+
Transcript Sequence

Network for GWHGAAEX013335

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module7

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms108.600
SRR2545915Juvenile tuber97.640
SRP108465SRR5643513five period of Gastrodia elata119.120
SRR5643514five period of Gastrodia elata215.160
SRR5643515five period of Gastrodia elata120.350
SRR5643524five period of Gastrodia elata188.500
SRR5643525five period of Gastrodia elata230.640
SRR5643528five period of Gastrodia elata94.020
SRR5643658five period of Gastrodia elata282.010
SRR5643659five period of Gastrodia elata74.510
SRR5643660five period of Gastrodia elata116.670
SRR5643661five period of Gastrodia elata67.020
SRR5643662five period of Gastrodia elata86.000
SRR5643663five period of Gastrodia elata70.530
SRR5643664five period of Gastrodia elata67.700
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1102.710
SRR6049655Rhizomagastrodiae_C368-T10_good_195.960
SRR6049656Rhizomagastrodiae_C368-T07_good_197.180
SRR6049657Rhizomagastrodiae_C368-T07_good_1160.430
SRR6049658Rhizomagastrodiae_C368-T04_good_190.450
SRR6049659Rhizomagastrodiae_C368-T04_good_1101.490
SRR6049660Rhizomagastrodiae_C368-T01_good_193.000
SRR6049661Rhizomagastrodiae_C368-T04_good_192.990
SRR6049662Rhizomagastrodiae_C368-T01_good_176.760
SRR6049663Rhizomagastrodiae_C368-T01_good_139.680
SRR6049664Rhizomagastrodiae_C368-T10_good_196.970
SRR6049665Rhizomagastrodiae_C368-T10_good_196.970
SRP279888GastroGastrodia elata tuber 31.87
JuvenJuvenile tuber336.28
Mother_GastroMother tuber of Gastrodia elata 68.05
Mother_JuvenMother tuber of Juvenile 101.07