Detail information of GWHGAAEX013338/evm.TU.scaffold_5.300


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|521464512|ref|YP_008151634.1|1.00E-27hypothetical protein SCE1572_26190 [Sorangium cellulosum So0157-2]
KOGKOG11874.00E-136Serine/threonine protein kinase
nrgi|672169351|ref|XP_008804702.1|0PREDICTED: putative serine/threonine-protein kinase [Phoenix dactylifera]
Swissprottr|C0LGH2|Y1561_ARATH2.00E-110Probable LRR receptor-like serine/threonine-protein kinase At1g56130 (Precursor)
trEMBLtr|V4TRC5|V4TRC5_9ROSI1.00E-174Uncharacterized protein {ECO:0000313|EMBL:ESR54255.1}
TAIRAT1G166704.00E-136Protein kinase superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001676600867663637-
Transcript Sequence

Network for GWHGAAEX013338

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.24Pkinase483144.80E-45
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyRLK-Pelle_DLSV

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0005524Molecular FunctionATP binding
GO:0004672Molecular Functionprotein kinase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms24.660
SRR2545915Juvenile tuber19.350
SRP108465SRR5643513five period of Gastrodia elata32.610
SRR5643514five period of Gastrodia elata8.260
SRR5643515five period of Gastrodia elata118.530
SRR5643524five period of Gastrodia elata23.310
SRR5643525five period of Gastrodia elata19.060
SRR5643528five period of Gastrodia elata26.810
SRR5643658five period of Gastrodia elata5.810
SRR5643659five period of Gastrodia elata78.740
SRR5643660five period of Gastrodia elata24.160
SRR5643661five period of Gastrodia elata36.300
SRR5643662five period of Gastrodia elata72.770
SRR5643663five period of Gastrodia elata35.720
SRR5643664five period of Gastrodia elata124.900
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_124.380
SRR6049655Rhizomagastrodiae_C368-T10_good_112.760
SRR6049656Rhizomagastrodiae_C368-T07_good_113.740
SRR6049657Rhizomagastrodiae_C368-T07_good_119.260
SRR6049658Rhizomagastrodiae_C368-T04_good_19.500
SRR6049659Rhizomagastrodiae_C368-T04_good_19.930
SRR6049660Rhizomagastrodiae_C368-T01_good_122.310
SRR6049661Rhizomagastrodiae_C368-T04_good_112.870
SRR6049662Rhizomagastrodiae_C368-T01_good_113.620
SRR6049663Rhizomagastrodiae_C368-T01_good_123.300
SRR6049664Rhizomagastrodiae_C368-T10_good_116.200
SRR6049665Rhizomagastrodiae_C368-T10_good_116.200
SRP279888GastroGastrodia elata tuber 9.51
JuvenJuvenile tuber1.18
Mother_GastroMother tuber of Gastrodia elata 131.77
Mother_JuvenMother tuber of Juvenile 34.09