Detail information of GWHGAAEX013342/evm.TU.scaffold_5.307


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|397690231|ref|YP_006527485.1|1.00E-20serine/threonine protein kinase with PASTA sensor(s) [Melioribacter roseus P3M-2]
KOGKOG06050NDR and related serine/threonine kinases
nrgi|672127768|ref|XP_008787357.1|0PREDICTED: serine/threonine-protein kinase 38-like [Phoenix dactylifera]
Swissprottr|Q9LE81|IRE_ARATH4.00E-71Probable serine/threonine protein kinase IRE {ECO:0000305}
trEMBLtr|M0STV6|M0STV6_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr4P31940_001}
TAIRAT4G143500AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001679204837963977+
Transcript Sequence

Network for GWHGAAEX013342

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.24Pkinase12907.60E-59
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyAGC_NDR

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0004674Molecular Functionprotein serine/threonine kinase activity
GO:0005524Molecular FunctionATP binding
GO:0004672Molecular Functionprotein kinase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms52.130
SRR2545915Juvenile tuber39.020
SRP108465SRR5643513five period of Gastrodia elata34.360
SRR5643514five period of Gastrodia elata32.560
SRR5643515five period of Gastrodia elata39.180
SRR5643524five period of Gastrodia elata35.700
SRR5643525five period of Gastrodia elata38.380
SRR5643528five period of Gastrodia elata42.130
SRR5643658five period of Gastrodia elata38.860
SRR5643659five period of Gastrodia elata22.680
SRR5643660five period of Gastrodia elata23.760
SRR5643661five period of Gastrodia elata24.360
SRR5643662five period of Gastrodia elata25.780
SRR5643663five period of Gastrodia elata25.950
SRR5643664five period of Gastrodia elata29.810
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_130.380
SRR6049655Rhizomagastrodiae_C368-T10_good_145.130
SRR6049656Rhizomagastrodiae_C368-T07_good_136.450
SRR6049657Rhizomagastrodiae_C368-T07_good_132.810
SRR6049658Rhizomagastrodiae_C368-T04_good_138.290
SRR6049659Rhizomagastrodiae_C368-T04_good_144.600
SRR6049660Rhizomagastrodiae_C368-T01_good_135.540
SRR6049661Rhizomagastrodiae_C368-T04_good_138.760
SRR6049662Rhizomagastrodiae_C368-T01_good_135.620
SRR6049663Rhizomagastrodiae_C368-T01_good_138.590
SRR6049664Rhizomagastrodiae_C368-T10_good_139.850
SRR6049665Rhizomagastrodiae_C368-T10_good_139.850
SRP279888GastroGastrodia elata tuber 37.02
JuvenJuvenile tuber33.66
Mother_GastroMother tuber of Gastrodia elata 60.71
Mother_JuvenMother tuber of Juvenile 48.99