Detail information of GWHGAAEX013343/evm.TU.scaffold_5.308


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|337751365|ref|YP_004645527.1|8.00E-44deoxyribonuclease [Paenibacillus mucilaginosus KNP414]
KOGKOG30201.00E-140TatD-related DNase
nrgi|720022427|ref|XP_010263037.1|0PREDICTED: putative deoxyribonuclease TATDN1 isoform X1 [Nelumbo nucifera]
trEMBLtr|D7U8S7|D7U8S7_VITVI5.00E-180Putative uncharacterized protein {ECO:0000313|EMBL:CBI39141.3}
TAIRAT3G523901.00E-140TatD related DNase

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001680025148047939-
Transcript Sequence

Network for GWHGAAEX013343

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01026.20TatD_DNase473205.50E-48
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0016788Molecular Functionhydrolase activity, acting on ester bonds

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms17.530
SRR2545915Juvenile tuber23.800
SRP108465SRR5643513five period of Gastrodia elata27.190
SRR5643514five period of Gastrodia elata33.730
SRR5643515five period of Gastrodia elata31.030
SRR5643524five period of Gastrodia elata29.310
SRR5643525five period of Gastrodia elata18.100
SRR5643528five period of Gastrodia elata19.730
SRR5643658five period of Gastrodia elata16.130
SRR5643659five period of Gastrodia elata25.060
SRR5643660five period of Gastrodia elata24.530
SRR5643661five period of Gastrodia elata26.870
SRR5643662five period of Gastrodia elata26.870
SRR5643663five period of Gastrodia elata29.450
SRR5643664five period of Gastrodia elata24.850
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_122.710
SRR6049655Rhizomagastrodiae_C368-T10_good_120.240
SRR6049656Rhizomagastrodiae_C368-T07_good_122.690
SRR6049657Rhizomagastrodiae_C368-T07_good_121.790
SRR6049658Rhizomagastrodiae_C368-T04_good_121.890
SRR6049659Rhizomagastrodiae_C368-T04_good_123.500
SRR6049660Rhizomagastrodiae_C368-T01_good_120.210
SRR6049661Rhizomagastrodiae_C368-T04_good_119.840
SRR6049662Rhizomagastrodiae_C368-T01_good_126.790
SRR6049663Rhizomagastrodiae_C368-T01_good_127.360
SRR6049664Rhizomagastrodiae_C368-T10_good_136.420
SRR6049665Rhizomagastrodiae_C368-T10_good_136.420
SRP279888GastroGastrodia elata tuber 39.88
JuvenJuvenile tuber22.75
Mother_GastroMother tuber of Gastrodia elata 24.21
Mother_JuvenMother tuber of Juvenile 21.27