Detail information of GWHGAAEX013353/evm.TU.scaffold_5.324


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|338175913|ref|YP_004652723.1|5.00E-45rRNA methylase [Parachlamydia acanthamoebae UV-7]
nrgi|743792435|ref|XP_010923681.1|1.98E-88PREDICTED: uncharacterized protein LOC105046711 [Elaeis guineensis]
trEMBLtr|B9RHZ5|B9RHZ5_RICCO1.00E-83S-adenosylmethionine-dependent methyltransferase, putative {ECO:0000313|EMBL:EEF48767.1}

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001688521318912408+
Transcript Sequence

Network for GWHGAAEX013353

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module7

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF06962.11rRNA_methylase1282697.80E-41
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms17.010
SRR2545915Juvenile tuber20.350
SRP108465SRR5643513five period of Gastrodia elata1.330
SRR5643514five period of Gastrodia elata2.250
SRR5643515five period of Gastrodia elata1.240
SRR5643524five period of Gastrodia elata1.100
SRR5643525five period of Gastrodia elata11.220
SRR5643528five period of Gastrodia elata9.130
SRR5643658five period of Gastrodia elata11.190
SRR5643659five period of Gastrodia elata15.220
SRR5643660five period of Gastrodia elata15.530
SRR5643661five period of Gastrodia elata18.030
SRR5643662five period of Gastrodia elata12.550
SRR5643663five period of Gastrodia elata17.230
SRR5643664five period of Gastrodia elata13.730
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_114.080
SRR6049655Rhizomagastrodiae_C368-T10_good_110.350
SRR6049656Rhizomagastrodiae_C368-T07_good_111.560
SRR6049657Rhizomagastrodiae_C368-T07_good_117.040
SRR6049658Rhizomagastrodiae_C368-T04_good_19.800
SRR6049659Rhizomagastrodiae_C368-T04_good_19.670
SRR6049660Rhizomagastrodiae_C368-T01_good_19.950
SRR6049661Rhizomagastrodiae_C368-T04_good_110.640
SRR6049662Rhizomagastrodiae_C368-T01_good_110.310
SRR6049663Rhizomagastrodiae_C368-T01_good_17.810
SRR6049664Rhizomagastrodiae_C368-T10_good_110.760
SRR6049665Rhizomagastrodiae_C368-T10_good_110.760
SRP279888GastroGastrodia elata tuber 22.87
JuvenJuvenile tuber30.07
Mother_GastroMother tuber of Gastrodia elata 14.39
Mother_JuvenMother tuber of Juvenile 19.08