Detail information of GWHGAAEX013355/evm.TU.scaffold_5.328
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|327404643|ref|YP_004345481.1| | 7.00E-15 | phosphatidate cytidylyltransferase [Fluviicola taffensis DSM 16823] |
| KOG | KOG1440 | 0 | CDP-diacylglycerol synthase |
| nr | gi|672109225|ref|XP_008789103.1| | 0 | PREDICTED: LOW QUALITY PROTEIN: phosphatidate cytidylyltransferase-like [Phoenix dactylifera] |
| Swissprot | tr|O04928|CDS1_ARATH | 0 | Phosphatidate cytidylyltransferase |
| trEMBL | tr|B8A9S4|B8A9S4_ORYSI | 0 | Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938} |
| TAIR | AT4G22340 | 0 | cytidinediphosphate diacylglycerol synthase 2 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000016 | 9175347 | 9198922 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX013355
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF01148.19 | CTP_transf_1 | 52 | 382 | 3.00E-84 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K00981 | E2.7.7.41, CDS1, CDS2, cdsA | Metabolic pathways | map01100 |
| Biosynthesis of secondary metabolites | map01110 | ||
| Glycerophospholipid metabolism | map00564 | ||
| Phosphatidylinositol signaling system | map04070 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0004605 | Molecular Function | phosphatidate cytidylyltransferase activity |
| GO:0016772 | Molecular Function | transferase activity, transferring phosphorus-containing groups |
| GO:0016020 | Cellular Component | membrane |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 20.380 |
| SRR2545915 | Juvenile tuber | 13.550 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 12.700 |
| SRR5643514 | five period of Gastrodia elata | 11.920 | |
| SRR5643515 | five period of Gastrodia elata | 11.480 | |
| SRR5643524 | five period of Gastrodia elata | 12.840 | |
| SRR5643525 | five period of Gastrodia elata | 17.180 | |
| SRR5643528 | five period of Gastrodia elata | 17.910 | |
| SRR5643658 | five period of Gastrodia elata | 18.410 | |
| SRR5643659 | five period of Gastrodia elata | 11.270 | |
| SRR5643660 | five period of Gastrodia elata | 11.570 | |
| SRR5643661 | five period of Gastrodia elata | 11.600 | |
| SRR5643662 | five period of Gastrodia elata | 13.670 | |
| SRR5643663 | five period of Gastrodia elata | 11.700 | |
| SRR5643664 | five period of Gastrodia elata | 12.390 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 14.830 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 17.620 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 14.440 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 12.670 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 15.110 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 17.380 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 14.070 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 14.860 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 15.910 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 14.350 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 15.600 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 15.600 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 20.97 |
| Juven | Juvenile tuber | 18.28 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 24.50 | |
| Mother_Juven | Mother tuber of Juvenile | 22.52 |