Gene detail

Detail information of GWHGAAEX013358/evm.TU.scaffold_5.333

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|310823631\|ref\|YP_003955989.1\|	7.00E-66	glycosyl transferase, family 2 [Stigmatella aurantiaca DW4/3-1]
nr	gi\|743856845\|ref\|XP_010941966.1\|	0	PREDICTED: probable xyloglucan glycosyltransferase 9 [Elaeis guineensis]
Swissprot	tr\|Q9ZQB9\|CSLCC_ARATH	0	Probable xyloglucan glycosyltransferase 12
trEMBL	tr\|A0A059BRM9\|A0A059BRM9_EUCGR	0	Uncharacterized protein {ECO:0000313\|EMBL:KCW68609.1}
TAIR	AT4G07960	0	Cellulose-synthase-like C12

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000016	9390062	9398917	-

Transcript Sequence
>GWHTAAEX013358 CATGAATCATCTATAAAGTATTTTATGTTGTTATTATAATATAATTTTCGTATATTATTAAAAATTGAGCCTGATGTTCAACAATGAATTGCAAGTCAAAATTTCCTTTTCGATTTACCTATGGAGCCATCTTCCCTGTAATTTTCTGCCCAAAGCGCGCCTGAAAACCGAAAGCTATCGACTGCTTGCCGCCGTGAATCTCCTGCTGTGCGCCGTTGCCGAGCGATTAGCAAAAATTTCTGCCTGTTGAGATGTTAAACATTGGCGAGTGATGGGGGAAGGTAAGCATGTTTGAAGATTGTTCAATAAGAAAACAAAAACAAAGACTATTAGATTATATGTGAAATATAAGAAGAATAACAATCATGAAATGATCCTTGTTCTGTTTGCCCCCTTTCTTCACAGAAGGAAGTGGAGAACTATAGTTATTTTTGAATTAGTCTGTTAGATTATAGACTTAGGTGCCGAGAATTAGAAGAAGACTGCGAGGGGAAGGCAGCAGCGCTTCTCCGAGCTGCAAGCGAAGAAAGTTGAGCGACTGACCGTCGTTGCTGCTACATTGTCTTCGATTTTTGCGATTTCCGTTTGGAAGCTGGATTCTTCGTCTGAGCGATTGAGGGAAATTTGGATCTTTGTTGCAATGGTTTCGTTATACCGTTGGTGGGCGAGGGAGAAGTTTAGGGTTTCCCTCAAAGCTCACCGCGCAGTTGGCTGTCTCACCTTCTTGCGATCGCTTGCAATTGACCTTTCCACCACAGTTCGCCGCCGCGTCGCCTCCGGCAGAACGGACATCGATTTGGGCGAGAGCGCAGCTCTTCGCCGCCGCCTCTACTCCTGCATCAAAGTTTCTCTTTGGCTCTCGGTCTCCCTCCTGGCATTTGAGATGACTGCTTATTTAAAAGGCTGGCATATCTCCACCCCTGACCTCTATGGCTTCGAGCTTCCTTCCTTTGGGATTCGCAGCTTCGTTGGCTCCATTTACGCAAAATGGCTCAGCTTTCGTGCCCATTGCATTGCTCCGCTTCTCCAGTTTCTTGCAAACACGTGTGTCATCCTCTTCCTGATTCAGAGCGCCGACCGTTTCATTCTCTGCTTGGGCTGCTTTTGGATCCGTTCAAGGAGAGTCAAACCACTTGCGATTGCCATTGCCGATGATTTGGAAGCCAGCAAATGCTTCCCTATGGTTCTCATCCAAATGCCCATGTGCAATGAGAAAGAGGTTTACAAGCAATCTATTGCTTCTGTTTGCAATTTGGACTGGCCAAAAGCCAACATGCTCATCCAAGTGCTGGATGATTCTGATGATCCCACAGCACAGGGTCTCATCAGGGAGGAGGTGGAGAAGTGGGAGCAAACTGGTGTTCAAATCTTCTACCGGCATCGCATAAAAAGACATGGATATAAAGCTGGAAATTTGAAGGCAGCCATGCGTTGCAGCTATGTGAAAGACTACGAGTTTGTGGCCATTTTTGATGCAGATTTTTATCCCACACCAGACTTCTTGAAGCGAACGGTTCCCCATTTTGAGGGGAAAGATGATTTAGCTTTAGTTCAAGCAAGGTGGTCATTTGTTAATAAAGATGAGAACTTACTAACCAGGCTTCAACACATTAATCTTTGCTTCCACTTTGAGGTGGAGCAGCAGGTTAATGGGGTTTTTATCAATTTTTTTGGGTTCAATGGAACTGCTGGAATCTGGAGAATTAAAGCCTTGGAGGACTCTGGAGGGTGGCTGGAGAGGAGTACAGTTGAGGATATGGACATTGCAGTTCGGGCACATCTCAGGGGTTGGAAATTCATCTTCTTGAATGATGTAGAGTGCCAATGTGAGCTACCAGAATCTTTTGAGGCCTACATGAAGCAGCAACATCGATGGCATTCCGGCCCAATGCAATTGTTCAAACTTTGTTTGCCCTCTATTATAAGGTCTAAGATTGCATTTTGGAAAAAGGCCAACCTTATTTTTCTGTTCTTTCTTCTTCGCAAGCTCATCTTACCATTCTATTCATTCACTCTTTTCTGCATCATCCTCCCCATGACAATGTTTGTGCCTGAAGCTGAGCTCCCAGCTTGGGTTGTTTGCTACATCCCAGCAATAATGTCCTTCCTGAACATCCTTCCTGCTCCTCGATCATTTCCATTCATTGTCCCATACCTTTTATTCGAGAACACAATGTCTGTAACCAAGTTCAATGCTATGATTTCTGGTTTATTTCAAATTGGAAATGCTTATGAATGGGTTGTTACCAAGAAATCCGGTCGATCTTCTGAAGGCAATCTTCTATCTCTCTTTGACAATGAGCCTAAGCAGGGTCGAGGCAGTTCAGCTCCTGTTGTCTACTCCATCACTGAAGAACTAGCAACAATCCCGAAGAAAAAATTAAATAAGCACAATAGAATGTATCGAAAAGAGCTTACACTTTCGATCCTTCTCTTAACTGCTGCTGCTCGCAGCTTGCTTGCTTCTCAAGGCATACACTTTTACTTCCTGCTCTTTCAAGGCATCTCATTTTTGTTGGTTGGCTTTGACTTAATTGGTGAGCAGATTGAGTAAACATAGCTGGAGGAACATAATATCGAAGGTGCTTAGCAGGCATTGGAATCACTGTTCCTTTACCGGAAGGAAAACTAGCAAAATGCTAGAAGCTCCTTTCTTTAGAGGTGTTGATAGTTTATTAGATGCATTTGCATCAGATTCTTTCTTGTCTTTTTTTATTCTTTTGTCAAAATTTTTGTATGCCACTTTCATAATTTTCTCCAATTTTCAAAATAAATCTTTATTTGATGTTAAGTTTGGATGCACTAGAATTATGTAAATACTTCCTAGGCCTGTATAAAATATGGAATTGATAATATGAATTGAACACAAGAAAAAGTGCACTGTTTAAGTGTA

Network for GWHGAAEX013358

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF13632.5	Glyco_trans_2_3	274	469	8.10E-21

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	8.660
SRP064423	SRR2545915	Juvenile tuber	7.950
SRP108465	SRR5643513	five period of Gastrodia elata	7.260
	SRR5643514	five period of Gastrodia elata	7.090
	SRR5643515	five period of Gastrodia elata	7.460
	SRR5643524	five period of Gastrodia elata	7.220
	SRR5643525	five period of Gastrodia elata	4.810
	SRR5643528	five period of Gastrodia elata	6.290
	SRR5643658	five period of Gastrodia elata	5.510
	SRR5643659	five period of Gastrodia elata	6.510
	SRR5643660	five period of Gastrodia elata	6.400
	SRR5643661	five period of Gastrodia elata	6.930
	SRR5643662	five period of Gastrodia elata	6.190
	SRR5643663	five period of Gastrodia elata	5.670
	SRR5643664	five period of Gastrodia elata	6.370
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	7.900
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	9.480
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	7.270
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	6.720
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	6.570
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	6.990
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	7.010
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	7.650
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	8.910
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	7.010
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	9.450
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	9.450
SRP279888	Gastro	Gastrodia elata tuber	4.72
	Juven	Juvenile tuber	5.45
	Mother_Gastro	Mother tuber of Gastrodia elata	9.41
	Mother_Juven	Mother tuber of Juvenile	5.99