Detail information of GWHGAAEX013362/evm.TU.scaffold_5.340


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|319955578|ref|YP_004166845.1|1.00E-3623S rRNA m(6)a-1618 methyltransferase [Cellulophaga algicola DSM 14237]
KOGKOG29125.00E-91Predicted DNA methylase
nrgi|743832734|ref|XP_010935062.1|1.16E-131PREDICTED: methyltransferase-like protein 16 homolog isoform X2 [Elaeis guineensis]
trEMBLtr|A0A061E661|A0A061E661_THECC4.00E-125Ribosomal RNA large subunit methyltransferase F isoform 3 {ECO:0000313|EMBL:EOX97728.1} (Fragment)
TAIRAT2G210705.00E-91methyltransferases

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001696676589668979+
Transcript Sequence

Network for GWHGAAEX013362

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF05971.11Methyltransf_10671827.70E-29
PF05971.11Methyltransf_102163311.00E-26
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0008168Molecular Functionmethyltransferase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1.610
SRR2545915Juvenile tuber1.810
SRP108465SRR5643513five period of Gastrodia elata0.000
SRR5643514five period of Gastrodia elata0.000
SRR5643515five period of Gastrodia elata0.000
SRR5643524five period of Gastrodia elata0.000
SRR5643525five period of Gastrodia elata0.000
SRR5643528five period of Gastrodia elata0.000
SRR5643658five period of Gastrodia elata0.000
SRR5643659five period of Gastrodia elata0.000
SRR5643660five period of Gastrodia elata0.000
SRR5643661five period of Gastrodia elata0.000
SRR5643662five period of Gastrodia elata0.000
SRR5643663five period of Gastrodia elata0.000
SRR5643664five period of Gastrodia elata0.000
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_10.570
SRR6049655Rhizomagastrodiae_C368-T10_good_11.390
SRR6049656Rhizomagastrodiae_C368-T07_good_11.010
SRR6049657Rhizomagastrodiae_C368-T07_good_10.860
SRR6049658Rhizomagastrodiae_C368-T04_good_12.140
SRR6049659Rhizomagastrodiae_C368-T04_good_12.530
SRR6049660Rhizomagastrodiae_C368-T01_good_11.390
SRR6049661Rhizomagastrodiae_C368-T04_good_12.520
SRR6049662Rhizomagastrodiae_C368-T01_good_10.830
SRR6049663Rhizomagastrodiae_C368-T01_good_11.090
SRR6049664Rhizomagastrodiae_C368-T10_good_10.140
SRR6049665Rhizomagastrodiae_C368-T10_good_10.140
SRP279888GastroGastrodia elata tuber 0.73
JuvenJuvenile tuber0.00
Mother_GastroMother tuber of Gastrodia elata 1.04
Mother_JuvenMother tuber of Juvenile 0.00