Gene detail

Detail information of GWHGAAEX013363/evm.TU.scaffold_5.341

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|392398651\|ref\|YP_006435252.1\|	4.00E-49	SAM-dependent methyltransferase [Flexibacter litoralis DSM 6794]
KOG	KOG2912	3.00E-119	Predicted DNA methylase
nr	gi\|743832727\|ref\|XP_010935061.1\|	0	PREDICTED: methyltransferase-like protein 16 isoform X1 [Elaeis guineensis]
trEMBL	tr\|A0A061E096\|A0A061E096_THECC	0	Methyltransferase-like protein {ECO:0000256\|PIRNR:PIRNR037350}
TAIR	AT2G21070	3.00E-119	methyltransferases

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000016	9672396	9685922	+

Transcript Sequence
>GWHTAAEX013363 CAAATAGCCCGTTTCACGTTTTTCATTCGCTGCGCTGATTGGGAAGAGGAGGCGGAGATGCTGATTGGGAAGAGGAGGCGGAAAGAGCGGCCGTCAATCCACCCTTCCAATCGCTATGCTGAAAAGCCACCAAACTTTACCCAACTTGCCTCACTTTATGCCTCTTTTGAGCCTTTCGTCTTCTTGTCGCGCTCCGGCCGCCCGACTATCGACTGGAAAGACTACAACGCCACTCGTGAGCTTACTCGAGTACTTCTCCTCCATGACCACGCCATTAAGTGGTGGGTTCCCGATGGGCAGCTTTGCCCTACAGTGCCAAATCGATCAAATTATATTTACTGGATTAATGATCTTCTGTCTTCCGATCTTATTCCCGCTAGAAATGGATCGGGTGATAGAATTAAAGGGTTCGACATTGGAACGGGCACCAGTTGTATATACCCCCTTCTTGGTGCATCTTTACTAGGGTGGAGCTTTGTCGCCTCTGATGTAACTAAAGTTGCTCTAGAGTGGGCTACAAATAATGTGGAGGGCAACCCCCATCTCGCAAAACACATCGAAATTAGGGATGCTAATGATTCATTTAATTTTGGTGACCAAACAATATTTCAAAGAGATATCGCCAATGAGGGTAACCTCGAGCCGTGTGTTGATGAGAAGACTCAAGTCCTGCATCAAGACAAAAAGGTTGACAGGACCTTACAACCTCCTGTCCTCACAGGTGTTGTAAAAGATGGTGAGAGTTTTGACTTCTGCATGTGCAACCCGCCATTTTTTGAAAGCATCGATGAAGCAGGTCTCAACCCTAAGACTTCATGTGGAGGGACACCAGAGGAGATGGTTTACCCTGGTGGGGAAAGGGCTTTTATTACACGTATCATTAAAGACAGTGTTGTGCTCAAACAATCTTTCAGGTGGTTCACAACAATGGTTGGAAGAAAGACCAACTTAAAGTTAATGAAATCAAAGCTCCGTGAGGCAAGAGTGTCCGTAGTGAAAACAACTGAGTTTGTCCAAGGACAGACAAGCCGATGGGGTCTTACATGGAGTTTCATTCCCCCTAACAAGGACTTAATTTCATCTAATACATCTATGAAAAGCCAAAATTCCTTTACCCTCGAGGGTTTGAAACGTCAGTGTGGTGCGTTTCAAGTATTAAACTCAGTGGAATCCTTCTTCTTGTTTAAAGGCATTTCCTGCAAATCTGACTTCACTTCCTTTTCTGTACTGGTGACTTTGCCTATAGAGCAAACTGACATAGCACCTGAAAATGATGTAGATTGCTTAAAATGTGCTGAGAACCGACCAATAAGCTTACCTGCTAGGTCACAATGCTCATTTTGTATTTCGTTACTTGAGCAGATCCCTGGCACTCTTCTTGTGAAATGGTCCTCATTGGAAAAAGATAAACCAGTCTCAGCGTTTGTTAATTCGCTCTTCAACGATTTGGAGGAATGTCTGAGAATGGAGTTCAGCCTCAAAGCTAGAAGTCACCCCTCAACGTTGTGATCATGCAATGTAAAAATGATGCAAGGTCATGCTTATTTTATTATATTTCACCTCGGCACTCCCTCACAATTTCAATGTCAGTCTTTTTTATTAAATATGAAATAACAATTAGCTTTAGAGTAAAAATTGTATGGTGAAAGGATGATTAATGATGAAAATTATACATGTTGCCATGCCTGGATCTTACTGGAGTTTTTTCTGGGGTTAGCTTGTAGACCATGAATTGCATGAGTTCTGCATTTTTAATAGTGGTCATTCTTCCATCATTTTCTTGTGTTTGAGCAGCAATTATAGTTTGAAGCATAGATAGTTAGCTTGCATTCCTGTCATTGGAAAGTCATTCTTGTCATGCTGATGCAGTATCCTGTCATTGAAAAGATCGTTCTTCCAGTCATTGGAGGCACTAGACCATTATATCAAGTAATATCTCATATCAATTAAAATTAATAATAGGGAAGACCTTGTATAGTGGACGTAGGTCATTTTATCAACAAAATGATTGTAAATTTTGTGATGTCTATCTTGTATGTACATTTGTTCTATCCTGTCATTTTATCCATCATTAAATATCAGTTGTCGGTGGCTCAATTCCTGTTTGAGTAGGCTCCGATGTTTGTTAGTTTCTCATGTTCTTTGAGCTTCCCTAAAAGGCCCCAACTAGATAATGGCTTCAACACTAATCGAATTTCAACTTGCCTAAGCTTGAGGACAACTTAGTAGATGGATGCGGGTATATTCAGTGAGTCCCAACGGGCTCGTGTAGCTGTGCTCAACAACCCTTATCTTTAATCTAACTAATAATCAAGCTGAATATGTAGCACTCCTTATTGGATTGTCTCATTATAGGAATTAACATCAAGAACAACATAATGTAGAATGACTCATTTAGTTGCTTGCAAAGCTAACACGAGTTACCAGATAATGGACTCAACAATTTACCTATACCACGAACTTATTCAATAATTGACAGCTAGTTTCCAGGGCTTTCATCAATCAGATCTTCCTTGGGAAAAAACTAGATGATCGACCTCATACCAAAGTTT

Network for GWHGAAEX013363

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF05971.11	Methyltransf_10	9	176	2.50E-45
PF05971.11	Methyltransf_10	218	333	2.10E-26

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0008168	Molecular Function	methyltransferase activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	12.820
SRP064423	SRR2545915	Juvenile tuber	10.450
SRP108465	SRR5643513	five period of Gastrodia elata	21.610
	SRR5643514	five period of Gastrodia elata	18.570
	SRR5643515	five period of Gastrodia elata	19.260
	SRR5643524	five period of Gastrodia elata	19.570
	SRR5643525	five period of Gastrodia elata	20.720
	SRR5643528	five period of Gastrodia elata	19.180
	SRR5643658	five period of Gastrodia elata	21.890
	SRR5643659	five period of Gastrodia elata	16.750
	SRR5643660	five period of Gastrodia elata	20.530
	SRR5643661	five period of Gastrodia elata	15.660
	SRR5643662	five period of Gastrodia elata	15.160
	SRR5643663	five period of Gastrodia elata	14.720
	SRR5643664	five period of Gastrodia elata	13.790
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	18.400
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	25.110
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	15.070
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	21.680
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	19.640
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	18.210
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	17.270
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	14.280
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	11.690
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	12.310
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	13.560
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	13.560
SRP279888	Gastro	Gastrodia elata tuber	14.31
	Juven	Juvenile tuber	41.22
	Mother_Gastro	Mother tuber of Gastrodia elata	19.85
	Mother_Juven	Mother tuber of Juvenile	32.13