Detail information of GWHGAAEX013366/evm.TU.scaffold_5.346


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG41976.00E-19FOG: PPR repeat
nrgi|566199524|ref|XP_002319140.2|6.94E-21pentatricopeptide repeat-containing family protein [Populus trichocarpa]
Swissprottr|Q9LFQ4|PP383_ARATH3.00E-19Pentatricopeptide repeat-containing protein At5g15010, mitochondrial (Precursor)
trEMBLtr|B9I5U4|B9I5U4_POPTR3.00E-21Pentatricopeptide repeat-containing family protein {ECO:0000313|EMBL:EEE95063.2}
TAIRAT5G150106.00E-19Tetratricopeptide repeat (TPR)-like superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001698367519852716+
Transcript Sequence

Network for GWHGAAEX013366

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module9

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms5.890
SRR2545915Juvenile tuber9.250
SRP108465SRR5643513five period of Gastrodia elata6.310
SRR5643514five period of Gastrodia elata5.460
SRR5643515five period of Gastrodia elata5.820
SRR5643524five period of Gastrodia elata7.340
SRR5643525five period of Gastrodia elata2.680
SRR5643528five period of Gastrodia elata3.280
SRR5643658five period of Gastrodia elata2.990
SRR5643659five period of Gastrodia elata4.440
SRR5643660five period of Gastrodia elata6.180
SRR5643661five period of Gastrodia elata7.240
SRR5643662five period of Gastrodia elata5.340
SRR5643663five period of Gastrodia elata7.230
SRR5643664five period of Gastrodia elata9.410
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_123.640
SRR6049655Rhizomagastrodiae_C368-T10_good_110.990
SRR6049656Rhizomagastrodiae_C368-T07_good_128.140
SRR6049657Rhizomagastrodiae_C368-T07_good_121.550
SRR6049658Rhizomagastrodiae_C368-T04_good_125.270
SRR6049659Rhizomagastrodiae_C368-T04_good_125.460
SRR6049660Rhizomagastrodiae_C368-T01_good_123.640
SRR6049661Rhizomagastrodiae_C368-T04_good_128.180
SRR6049662Rhizomagastrodiae_C368-T01_good_120.670
SRR6049663Rhizomagastrodiae_C368-T01_good_130.330
SRR6049664Rhizomagastrodiae_C368-T10_good_129.320
SRR6049665Rhizomagastrodiae_C368-T10_good_129.320
SRP279888GastroGastrodia elata tuber 48.76
JuvenJuvenile tuber49.21
Mother_GastroMother tuber of Gastrodia elata 25.69
Mother_JuvenMother tuber of Juvenile 28.20