Detail information of GWHGAAEX013368/evm.TU.scaffold_5.350


Functional Annotation

DatabaseOrthologsE valueAnnotation

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000161008228410117764-
Transcript Sequence

Network for GWHGAAEX013368

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K06688UBE2C, UBC11 Ubiquitin mediated proteolysis map04120

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1.590
SRR2545915Juvenile tuber2.190
SRP108465SRR5643513five period of Gastrodia elata0.400
SRR5643514five period of Gastrodia elata1.650
SRR5643515five period of Gastrodia elata2.210
SRR5643524five period of Gastrodia elata0.480
SRR5643525five period of Gastrodia elata1.050
SRR5643528five period of Gastrodia elata0.400
SRR5643658five period of Gastrodia elata0.460
SRR5643659five period of Gastrodia elata0.640
SRR5643660five period of Gastrodia elata1.760
SRR5643661five period of Gastrodia elata1.070
SRR5643662five period of Gastrodia elata0.180
SRR5643663five period of Gastrodia elata2.020
SRR5643664five period of Gastrodia elata0.980
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_10.390
SRR6049655Rhizomagastrodiae_C368-T10_good_10.670
SRR6049656Rhizomagastrodiae_C368-T07_good_10.990
SRR6049657Rhizomagastrodiae_C368-T07_good_10.300
SRR6049658Rhizomagastrodiae_C368-T04_good_10.000
SRR6049659Rhizomagastrodiae_C368-T04_good_10.220
SRR6049660Rhizomagastrodiae_C368-T01_good_10.000
SRR6049661Rhizomagastrodiae_C368-T04_good_10.000
SRR6049662Rhizomagastrodiae_C368-T01_good_10.150
SRR6049663Rhizomagastrodiae_C368-T01_good_10.300
SRR6049664Rhizomagastrodiae_C368-T10_good_10.530
SRR6049665Rhizomagastrodiae_C368-T10_good_10.530
SRP279888GastroGastrodia elata tuber 0.50
JuvenJuvenile tuber0.36
Mother_GastroMother tuber of Gastrodia elata 0.55
Mother_JuvenMother tuber of Juvenile 0.29