Detail information of GWHGAAEX013369/evm.TU.scaffold_5.351
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|255533242|ref|YP_003093614.1| | 4.00E-23 | metallophosphoesterase [Pedobacter heparinus DSM 2366] |
| KOG | KOG1378 | 0 | Purple acid phosphatase |
| nr | gi|695004966|ref|XP_009388911.1| | 0 | PREDICTED: probable inactive purple acid phosphatase 2 [Musa acuminata subsp. malaccensis] |
| Swissprot | tr|Q9LMG7|PPA2_ARATH | 0 | Probable inactive purple acid phosphatase 2 (Precursor) |
| trEMBL | tr|M0S7P5|M0S7P5_MUSAM | 0 | Purple acid phosphatase {ECO:0000256|RuleBase:RU361203} |
| TAIR | AT1G13900 | 0 | Purple acid phosphatases superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000016 | 10123439 | 10141253 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX013369
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF16656.4 | Pur_ac_phosph_N | 147 | 247 | 6.70E-18 |
| PF00149.27 | Metallophos | 285 | 488 | 5.30E-16 |
| PF14008.5 | Metallophos_C | 511 | 579 | 6.90E-14 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0046872 | Molecular Function | metal ion binding |
| GO:0003993 | Molecular Function | acid phosphatase activity |
| GO:0016787 | Molecular Function | hydrolase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 42.420 |
| SRR2545915 | Juvenile tuber | 51.930 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 15.390 |
| SRR5643514 | five period of Gastrodia elata | 11.500 | |
| SRR5643515 | five period of Gastrodia elata | 16.250 | |
| SRR5643524 | five period of Gastrodia elata | 11.940 | |
| SRR5643525 | five period of Gastrodia elata | 75.290 | |
| SRR5643528 | five period of Gastrodia elata | 49.580 | |
| SRR5643658 | five period of Gastrodia elata | 56.480 | |
| SRR5643659 | five period of Gastrodia elata | 21.870 | |
| SRR5643660 | five period of Gastrodia elata | 23.460 | |
| SRR5643661 | five period of Gastrodia elata | 24.550 | |
| SRR5643662 | five period of Gastrodia elata | 46.760 | |
| SRR5643663 | five period of Gastrodia elata | 44.390 | |
| SRR5643664 | five period of Gastrodia elata | 27.450 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 21.450 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 17.110 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 18.590 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 22.710 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 22.040 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 33.140 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 24.960 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 25.600 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 21.530 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 18.070 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 16.580 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 16.580 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 22.84 |
| Juven | Juvenile tuber | 41.47 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 30.86 | |
| Mother_Juven | Mother tuber of Juvenile | 30.04 |