Detail information of GWHGAAEX013407/evm.TU.scaffold_50.12


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG42872.00E-158Pectin acetylesterase and similar proteins
nrgi|672176580|ref|XP_008808358.1|0PREDICTED: protein notum homolog [Phoenix dactylifera]
trEMBLtr|Q6YVK6|Q6YVK6_ORYSJ0cDNA clone:J013158P10, full insert sequence {ECO:0000313|EMBL:BAG91018.1}
TAIRAT5G452802.00E-158Pectinacetylesterase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000053263222280511-
Transcript Sequence

Network for GWHGAAEX013407

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03283.12PAE243711.70E-163
Protein Sequence

Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyCE13

KEGG pathway

KO Enzyme pathway mapID
K19882NOTUM Wnt signaling pathway map04310

Gene Ontology

GO term OntologyName
GO:0016787Molecular Functionhydrolase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1.980
SRR2545915Juvenile tuber2.230
SRP108465SRR5643513five period of Gastrodia elata1.210
SRR5643514five period of Gastrodia elata2.400
SRR5643515five period of Gastrodia elata1.600
SRR5643524five period of Gastrodia elata2.300
SRR5643525five period of Gastrodia elata5.590
SRR5643528five period of Gastrodia elata5.410
SRR5643658five period of Gastrodia elata4.730
SRR5643659five period of Gastrodia elata1.810
SRR5643660five period of Gastrodia elata1.210
SRR5643661five period of Gastrodia elata1.100
SRR5643662five period of Gastrodia elata2.160
SRR5643663five period of Gastrodia elata4.820
SRR5643664five period of Gastrodia elata2.240
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_10.620
SRR6049655Rhizomagastrodiae_C368-T10_good_10.290
SRR6049656Rhizomagastrodiae_C368-T07_good_11.760
SRR6049657Rhizomagastrodiae_C368-T07_good_10.990
SRR6049658Rhizomagastrodiae_C368-T04_good_10.730
SRR6049659Rhizomagastrodiae_C368-T04_good_10.210
SRR6049660Rhizomagastrodiae_C368-T01_good_10.740
SRR6049661Rhizomagastrodiae_C368-T04_good_11.240
SRR6049662Rhizomagastrodiae_C368-T01_good_12.530
SRR6049663Rhizomagastrodiae_C368-T01_good_11.010
SRR6049664Rhizomagastrodiae_C368-T10_good_11.340
SRR6049665Rhizomagastrodiae_C368-T10_good_11.340
SRP279888GastroGastrodia elata tuber 1.72
JuvenJuvenile tuber0.39
Mother_GastroMother tuber of Gastrodia elata 1.07
Mother_JuvenMother tuber of Juvenile 0.60