Detail information of GWHGAAEX013418/evm.TU.scaffold_50.22


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|182414265|ref|YP_001819331.1|4.00E-27cyclophilin type peptidyl-prolyl cis-trans isomerase [Opitutus terrae PB90-1]
KOGKOG08848.00E-110Similar to cyclophilin-type peptidyl-prolyl cis-trans isomerase
nrgi|743773349|ref|XP_010917015.1|1.81E-127PREDICTED: peptidyl-prolyl cis-trans isomerase CYP23 [Elaeis guineensis]
Swissprottr|Q8LDR3|CYP23_ARATH3.00E-114Peptidyl-prolyl cis-trans isomerase CYP23 (Precursor)
trEMBLtr|D7TNB2|D7TNB2_VITVI1.00E-122Putative uncharacterized protein {ECO:0000313|EMBL:CBI31985.3}
TAIRAT1G269408.00E-110Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000053485617503309-
Transcript Sequence

Network for GWHGAAEX013418

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00160.20Pro_isomerase381901.30E-34
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0000413Biological Processprotein peptidyl-prolyl isomerization
GO:0003755Molecular Functionpeptidyl-prolyl cis-trans isomerase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms31.890
SRR2545915Juvenile tuber52.040
SRP108465SRR5643513five period of Gastrodia elata49.300
SRR5643514five period of Gastrodia elata56.200
SRR5643515five period of Gastrodia elata46.280
SRR5643524five period of Gastrodia elata55.060
SRR5643525five period of Gastrodia elata45.020
SRR5643528five period of Gastrodia elata56.400
SRR5643658five period of Gastrodia elata50.370
SRR5643659five period of Gastrodia elata35.890
SRR5643660five period of Gastrodia elata33.470
SRR5643661five period of Gastrodia elata50.030
SRR5643662five period of Gastrodia elata33.510
SRR5643663five period of Gastrodia elata35.360
SRR5643664five period of Gastrodia elata31.620
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_141.560
SRR6049655Rhizomagastrodiae_C368-T10_good_141.130
SRR6049656Rhizomagastrodiae_C368-T07_good_150.480
SRR6049657Rhizomagastrodiae_C368-T07_good_130.150
SRR6049658Rhizomagastrodiae_C368-T04_good_125.920
SRR6049659Rhizomagastrodiae_C368-T04_good_126.770
SRR6049660Rhizomagastrodiae_C368-T01_good_129.480
SRR6049661Rhizomagastrodiae_C368-T04_good_129.350
SRR6049662Rhizomagastrodiae_C368-T01_good_155.420
SRR6049663Rhizomagastrodiae_C368-T01_good_141.020
SRR6049664Rhizomagastrodiae_C368-T10_good_166.830
SRR6049665Rhizomagastrodiae_C368-T10_good_166.830
SRP279888GastroGastrodia elata tuber 39.64
JuvenJuvenile tuber22.59
Mother_GastroMother tuber of Gastrodia elata 31.44
Mother_JuvenMother tuber of Juvenile 20.76