Detail information of GWHGAAEX013426/evm.TU.scaffold_50.31


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG29731.00E-113Uncharacterized conserved protein
nrgi|743802182|ref|XP_010926545.1|3.36E-140PREDICTED: protein HGH1 homolog [Elaeis guineensis]
trEMBLtr|M0U5M9|M0U5M9_MUSAM8.00E-132Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_AchrUn_randomP02170_001}
TAIRAT1G143001.00E-113ARM repeat superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000053706320712495-
Transcript Sequence

Network for GWHGAAEX013426

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04063.13DUF3831052734.80E-36
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms6.180
SRR2545915Juvenile tuber5.230
SRP108465SRR5643513five period of Gastrodia elata10.970
SRR5643514five period of Gastrodia elata11.990
SRR5643515five period of Gastrodia elata9.400
SRR5643524five period of Gastrodia elata11.290
SRR5643525five period of Gastrodia elata11.840
SRR5643528five period of Gastrodia elata8.990
SRR5643658five period of Gastrodia elata6.950
SRR5643659five period of Gastrodia elata16.920
SRR5643660five period of Gastrodia elata18.530
SRR5643661five period of Gastrodia elata17.850
SRR5643662five period of Gastrodia elata15.590
SRR5643663five period of Gastrodia elata15.230
SRR5643664five period of Gastrodia elata16.770
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_113.770
SRR6049655Rhizomagastrodiae_C368-T10_good_118.660
SRR6049656Rhizomagastrodiae_C368-T07_good_116.370
SRR6049657Rhizomagastrodiae_C368-T07_good_118.820
SRR6049658Rhizomagastrodiae_C368-T04_good_128.430
SRR6049659Rhizomagastrodiae_C368-T04_good_127.450
SRR6049660Rhizomagastrodiae_C368-T01_good_120.140
SRR6049661Rhizomagastrodiae_C368-T04_good_124.870
SRR6049662Rhizomagastrodiae_C368-T01_good_116.850
SRR6049663Rhizomagastrodiae_C368-T01_good_118.450
SRR6049664Rhizomagastrodiae_C368-T10_good_113.980
SRR6049665Rhizomagastrodiae_C368-T10_good_113.980
SRP279888GastroGastrodia elata tuber 26.44
JuvenJuvenile tuber23.93
Mother_GastroMother tuber of Gastrodia elata 30.60
Mother_JuvenMother tuber of Juvenile 26.17