Detail information of GWHGAAEX013430/evm.TU.scaffold_50.37


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|389860673|ref|YP_006362913.1|5.00E-0850S ribosomal protein L34e [Thermogladius cellulolyticus 1633]
KOGKOG17904.00E-6660s ribosomal protein L34
nrgi|89276319|gb|ABD66516.1|5.60E-74ribosomal protein [Gymnadenia conopsea]
Swissprottr|P40590|RL34_PEA1.00E-6960S ribosomal protein L34
trEMBLtr|Q207T4|Q207T4_GYMCO2.00E-74Ribosomal protein {ECO:0000313|EMBL:ABD66516.1}
TAIRAT3G289004.00E-66Ribosomal protein L34e superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000053793352798646+
Transcript Sequence

Network for GWHGAAEX013430

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01199.17Ribosomal_L34e1967.60E-38
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K02915RP-L34e, RPL34 Ribosome map03010

Gene Ontology

GO term OntologyName
GO:0006412Biological Processtranslation
GO:0003735Molecular Functionstructural constituent of ribosome
GO:0005840Cellular Componentribosome

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms350.360
SRR2545915Juvenile tuber716.360
SRP108465SRR5643513five period of Gastrodia elata564.400
SRR5643514five period of Gastrodia elata637.640
SRR5643515five period of Gastrodia elata610.230
SRR5643524five period of Gastrodia elata592.690
SRR5643525five period of Gastrodia elata537.310
SRR5643528five period of Gastrodia elata548.090
SRR5643658five period of Gastrodia elata631.840
SRR5643659five period of Gastrodia elata788.820
SRR5643660five period of Gastrodia elata747.340
SRR5643661five period of Gastrodia elata848.450
SRR5643662five period of Gastrodia elata989.790
SRR5643663five period of Gastrodia elata845.990
SRR5643664five period of Gastrodia elata910.430
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1637.230
SRR6049655Rhizomagastrodiae_C368-T10_good_1436.340
SRR6049656Rhizomagastrodiae_C368-T07_good_1619.230
SRR6049657Rhizomagastrodiae_C368-T07_good_1647.940
SRR6049658Rhizomagastrodiae_C368-T04_good_1570.640
SRR6049659Rhizomagastrodiae_C368-T04_good_1626.390
SRR6049660Rhizomagastrodiae_C368-T01_good_1611.850
SRR6049661Rhizomagastrodiae_C368-T04_good_1603.930
SRR6049662Rhizomagastrodiae_C368-T01_good_1597.270
SRR6049663Rhizomagastrodiae_C368-T01_good_1624.910
SRR6049664Rhizomagastrodiae_C368-T10_good_1616.890
SRR6049665Rhizomagastrodiae_C368-T10_good_1616.890
SRP279888GastroGastrodia elata tuber 724.98
JuvenJuvenile tuber473.08
Mother_GastroMother tuber of Gastrodia elata 263.27
Mother_JuvenMother tuber of Juvenile 221.04