Gene detail

Detail information of GWHGAAEX013452/evm.TU.scaffold_50.58

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG2372	7.00E-22	Oxidation resistance protein
nr	gi\|743841149\|ref\|XP_010937456.1\|	3.12E-88	PREDICTED: oxidation resistance protein 1 [Elaeis guineensis]
trEMBL	tr\|M0YK77\|M0YK77_HORVD	9.00E-85	Uncharacterized protein {ECO:0000313\|EnsemblPlants:MLOC_70155.5, ECO:0000313\|EnsemblPlants:MLOC_70155.8}
TAIR	AT4G39870	7.00E-22	TLD-domain containing nucleolar protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000053	1272914	1286579	-

Transcript Sequence
>GWHTAAEX013452 AAAAATTGTACCTAAACTGTTTGTGTGTGTGCATATTGATATGCTCTTTCTTTTCAGTTAGAAATATAATGATTTCAGATCGGAGCGCGAAGGTAATCACACCATTCACTGATGCTTATTTGATACAAGAAAAGAAAAACATCTTCTTTGTGCCTGCATGCTTTGCAAGTCTCTCAATGGCGGATGCGGATAGTACACAATAGGGTGAGGAAATCACGAGCGACGAAGTGCCGCTACTCTGCCAGGAGAAGATCAAAACAATGGGCTATTTGCCCTCTTCTCTTCGCAATAAGGCGGCGCATTTGGTCTCCGATCTCACAACCGTTATCCTCAATCCACTTTCTGACCGATCCCCAGAGCAAATAGATGAAGCTGGGATAACAAGTTCAGACAAGTCAGAAAAGGATTCTGAGGTACCGAATGGGCCTGATACTTCATCTTTTGCAGCTTTCCTTGTCTCGTTTCTCTCTTCTTCAGATTCTAGTACCGATGTTACAAAAGAACCGGAGCAGCAGCAAGCAGGAACAGGGGAAACTGAAACTTTAGAAACAGTAATAAAGGACCATAGTGTGAAGAAAGGTCTACTTTCAAGAGGCAAGCATTCTGTCGGAAAAGCCATTCAAAAAGTAGCAAGAATTAGTGGATATAGGCAGAGCTCAGTACCAAATGCTGAAGTTGCTACTACAACTGATTTAGAACTTGTTGGACAAGAAATGGTAAACTTCTCTGTTGACAAGAGGTCAAAATTTAAGCTGCCAGATTTTTCTGAATCATCATCACTAATGTCCGAAGATATGAGAAGGTTTCTTTATTTCTCACTACCTGCAGTTGCTCAGGGGAGGAATTGGGTATTGATTTACAGTACTTGGAAGCATGGGATATCACTATCAACAATGTACAGAAGAAGCTTGCTTTGCCCTGGTTACTGTTTACTGGTTGTTGGGGATGAGAAAGGAGCTGTGTTTGGTGGTTTTGTCGAGGCGCCATTCCGACCATCTAATAAGAAGTACCAGGTTGCTGGCACATTTAAATTCAACAAATTTGCATATCTTTTAATGTAAAATTTTAATTTTTTATTTATTAAAATGGTATGGTATGTTATAAAATGGTGTATCAGCTGTGATGAACTTGCATTATTCCATGGAAAAAAATGCTATGTTACCCCCCAAAAAAGAGCTCCAAGATAACCCAAAGAGCTACAAAATGGATAGGGCTAAACTATATGACAGGCCTACTGTGATTACATTCATCCCCTGCACTCAGAACTGCCACATCATCGAAATTTAGCTTTGGGTTGTTTTGGGGGCATGGTAGCAACTGTTGTTCCAAACTGTAAATCCTAAATTATAAACTCGCTTTATAGTTTAGTCTTGTTTTTTTTTTTTTTTTTGTTGCTTCCTGCAGGGGACAAACAGTAGCTTCGTTTTCACAAATCTTTACGACAACCCAATCATTTTTCACCCTACAGGTAACCAGATTTAATTTTTGCCCCTTCATCTAATACTTAAGATTTGCAATGTAATGAGTTAATGTTTCCTAACAACAACCTTTTCATCTGTCCTTCAATTTTGTTGTAGTTTTCTTAACAATTTTATTCATATATTTTCATCAAATGGTGTAATAAATACCTACTGAGTCAATCGGGTAAGGGAATTTTATATATCTCGACTGAAACGTGCACTTTGCTAATTTTATCTTTTGCTTATTGCCTGGGAGTAAAAATGGGGGGGACTGACTTGAAAATTACTCAACTCAAAATGAGTAAACCCAAATAGAAACTATCTAACAAATGGGCCAAAATTTTCAACTCAAATCCGACTCACATCTGACCCTATTGATCCAAACGCAGCCCATTTTTACATTGATATAAAAGCATTACATAAACTAAAAGTGTTTTGACCTGAAGGTGGCCTGCTTGACTTAAACCCCGAACACAATCAATTAAATATTTTGTGCAAGGAAACATATCAAATCAGGTATATGGGCCGACCTGAACCTAACTCAAATATTGTATAGGTCTAAACCTTGCATCCCCGCCTTCTCCAAGGTCAAGTTTAAATCAAGCTTTCATGTCGGGTTACATTTTGACACTCTTAGTTATTCCAGCTTTCTTGCAAATGCTGTTGAGTTTGATGAAAAATAAAACATATAAATCCCAAAATTTCAGGTGCTAATCATTATTTTACTCTCTTCTCTCCGGAGTACCTAGCTATGGGTGGAGGTAGTCACTTCGCTATATACTTGGAAGCTGACTTGTTGAATGGTTCAAGTTATGAGTCAGAAACCTTTGGCAATCCATGCCTTGCATATTCTGAGGATTTTAAAGTGAAGGAGGTTGAGCTATGGGGCTTTGTCTATCCCTCAAAATATGAAGAGATGCTAACTTTGTGTCGAACGGAGAAACAGGCTATCTGGAACTGGTAAATTGAATCGCTGCTCATTCATTAATCCAATAATCAAGTTCGGGTCATCTTACCCATTTTCTTGTGAACTGATTCACATAAAAAAGTTGTGAATCTGCAGCATTTCGATCTGTATATAATAGATTCAAAATTAACAGATTGTGAGGGAGAATACATTTTATCAACTGTGATGCATTAAGAGAAGCATGTTAATTACTATGTACATAAAACTGTCACCCTCAGCATGATATTCTTAATGTGTAATTTTGATCCTGTGAGAATTTGGTGTTCTAAATGGGTAGTTCAGTCTTCTGTTAAGTTATTTAGATTGTGGATTTGATTTAAAGAATTAAATATAATCTTCAGTTGAATGGATACTTTGTTTGGTGGCATATTGTTGGTGGTTTGTATGTATGAATGCTGAAAGTTATTTAGATTTTTGTACATG

Network for GWHGAAEX013452

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF07534.15	TLD	198	251	2.30E-08

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	13.210
SRP064423	SRR2545915	Juvenile tuber	15.970
SRP108465	SRR5643513	five period of Gastrodia elata	13.430
	SRR5643514	five period of Gastrodia elata	16.220
	SRR5643515	five period of Gastrodia elata	14.910
	SRR5643524	five period of Gastrodia elata	15.560
	SRR5643525	five period of Gastrodia elata	17.570
	SRR5643528	five period of Gastrodia elata	16.250
	SRR5643658	five period of Gastrodia elata	20.940
	SRR5643659	five period of Gastrodia elata	13.130
	SRR5643660	five period of Gastrodia elata	13.030
	SRR5643661	five period of Gastrodia elata	11.570
	SRR5643662	five period of Gastrodia elata	12.040
	SRR5643663	five period of Gastrodia elata	14.250
	SRR5643664	five period of Gastrodia elata	12.030
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	11.190
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	10.520
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	11.490
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	10.070
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	11.520
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	11.070
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	10.300
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	9.540
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	9.140
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	10.040
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	11.170
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	11.170
SRP279888	Gastro	Gastrodia elata tuber	16.09
	Juven	Juvenile tuber	18.41
	Mother_Gastro	Mother tuber of Gastrodia elata	18.80
	Mother_Juven	Mother tuber of Juvenile	17.90