Detail information of GWHGAAEX013459/evm.TU.scaffold_50.68


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG12671.00E-09Mitochondrial transcription termination factor, mTERF
nrgi|297724611|ref|NP_001174669.1|3.45E-21Os06g0224650 [Oryza sativa Japonica Group]
trEMBLtr|A3B9U0|A3B9U0_ORYSJ1.00E-21Os06g0224650 protein {ECO:0000313|EMBL:BAH93397.1}
TAIRAT1G62090_21.00E-09Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005315456841548653+
Transcript Sequence

Network for GWHGAAEX013459

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02536.13mTERF411262.50E-15
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilymTERF

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003690Molecular Functiondouble-stranded DNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.210
SRR2545915Juvenile tuber0.000
SRP108465SRR5643513five period of Gastrodia elata0.120
SRR5643514five period of Gastrodia elata0.170
SRR5643515five period of Gastrodia elata0.110
SRR5643524five period of Gastrodia elata0.470
SRR5643525five period of Gastrodia elata0.230
SRR5643528five period of Gastrodia elata0.350
SRR5643658five period of Gastrodia elata0.000
SRR5643659five period of Gastrodia elata0.090
SRR5643660five period of Gastrodia elata0.000
SRR5643661five period of Gastrodia elata0.100
SRR5643662five period of Gastrodia elata0.000
SRR5643663five period of Gastrodia elata0.000
SRR5643664five period of Gastrodia elata0.380
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_10.000
SRR6049655Rhizomagastrodiae_C368-T10_good_10.000
SRR6049656Rhizomagastrodiae_C368-T07_good_10.170
SRR6049657Rhizomagastrodiae_C368-T07_good_10.160
SRR6049658Rhizomagastrodiae_C368-T04_good_10.000
SRR6049659Rhizomagastrodiae_C368-T04_good_10.120
SRR6049660Rhizomagastrodiae_C368-T01_good_10.000
SRR6049661Rhizomagastrodiae_C368-T04_good_10.430
SRR6049662Rhizomagastrodiae_C368-T01_good_10.080
SRR6049663Rhizomagastrodiae_C368-T01_good_10.000
SRR6049664Rhizomagastrodiae_C368-T10_good_10.480
SRR6049665Rhizomagastrodiae_C368-T10_good_10.480
SRP279888GastroGastrodia elata tuber 0.07
JuvenJuvenile tuber1.00
Mother_GastroMother tuber of Gastrodia elata 0.41
Mother_JuvenMother tuber of Juvenile 0.83