Detail information of GWHGAAEX013461/evm.TU.scaffold_50.70


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG12674.00E-41Mitochondrial transcription termination factor, mTERF
nrgi|672168958|ref|XP_008804497.1|9.15E-84PREDICTED: uncharacterized protein LOC103717770 [Phoenix dactylifera]
trEMBLtr|M0RL19|M0RL19_MUSAM7.00E-65Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr10P24440_001}
TAIRAT1G211504.00E-41Mitochondrial transcription termination factor family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005315576621558792+
Transcript Sequence

Network for GWHGAAEX013461

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02536.13mTERF752082.20E-16
PF02536.13mTERF1343275.70E-23
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilymTERF

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003690Molecular Functiondouble-stranded DNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms11.380
SRR2545915Juvenile tuber8.260
SRP108465SRR5643513five period of Gastrodia elata7.320
SRR5643514five period of Gastrodia elata10.790
SRR5643515five period of Gastrodia elata8.110
SRR5643524five period of Gastrodia elata9.240
SRR5643525five period of Gastrodia elata10.210
SRR5643528five period of Gastrodia elata12.460
SRR5643658five period of Gastrodia elata8.620
SRR5643659five period of Gastrodia elata10.320
SRR5643660five period of Gastrodia elata8.370
SRR5643661five period of Gastrodia elata10.190
SRR5643662five period of Gastrodia elata12.780
SRR5643663five period of Gastrodia elata8.660
SRR5643664five period of Gastrodia elata9.490
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_112.000
SRR6049655Rhizomagastrodiae_C368-T10_good_113.570
SRR6049656Rhizomagastrodiae_C368-T07_good_110.060
SRR6049657Rhizomagastrodiae_C368-T07_good_18.100
SRR6049658Rhizomagastrodiae_C368-T04_good_111.570
SRR6049659Rhizomagastrodiae_C368-T04_good_19.140
SRR6049660Rhizomagastrodiae_C368-T01_good_18.140
SRR6049661Rhizomagastrodiae_C368-T04_good_17.680
SRR6049662Rhizomagastrodiae_C368-T01_good_110.200
SRR6049663Rhizomagastrodiae_C368-T01_good_19.940
SRR6049664Rhizomagastrodiae_C368-T10_good_110.350
SRR6049665Rhizomagastrodiae_C368-T10_good_110.350
SRP279888GastroGastrodia elata tuber 9.48
JuvenJuvenile tuber8.22
Mother_GastroMother tuber of Gastrodia elata 13.67
Mother_JuvenMother tuber of Juvenile 14.30