Detail information of GWHGAAEX013463/evm.TU.scaffold_50.72


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG20275.00E-119Spindle pole body protein
nrgi|743849250|ref|XP_010939573.1|2.36E-153PREDICTED: IST1 homolog [Elaeis guineensis]
trEMBLtr|F6HVW4|F6HVW4_VITVI3.00E-149Putative uncharacterized protein {ECO:0000313|EMBL:CCB58827.1}
TAIRAT1G342205.00E-119Regulator of Vps4 activity in the MVB pathway protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005315966541613746+
Transcript Sequence

Network for GWHGAAEX013463

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03398.13Ist1161806.50E-60
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K19476IST1 Endocytosis map04144

Gene Ontology

GO term OntologyName
GO:0015031Biological Processprotein transport

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms34.490
SRR2545915Juvenile tuber34.740
SRP108465SRR5643513five period of Gastrodia elata34.090
SRR5643514five period of Gastrodia elata34.110
SRR5643515five period of Gastrodia elata49.850
SRR5643524five period of Gastrodia elata39.020
SRR5643525five period of Gastrodia elata40.910
SRR5643528five period of Gastrodia elata53.420
SRR5643658five period of Gastrodia elata43.250
SRR5643659five period of Gastrodia elata45.490
SRR5643660five period of Gastrodia elata38.470
SRR5643661five period of Gastrodia elata50.130
SRR5643662five period of Gastrodia elata53.710
SRR5643663five period of Gastrodia elata49.830
SRR5643664five period of Gastrodia elata58.680
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_132.580
SRR6049655Rhizomagastrodiae_C368-T10_good_147.010
SRR6049656Rhizomagastrodiae_C368-T07_good_132.030
SRR6049657Rhizomagastrodiae_C368-T07_good_130.300
SRR6049658Rhizomagastrodiae_C368-T04_good_128.460
SRR6049659Rhizomagastrodiae_C368-T04_good_131.230
SRR6049660Rhizomagastrodiae_C368-T01_good_133.670
SRR6049661Rhizomagastrodiae_C368-T04_good_127.340
SRR6049662Rhizomagastrodiae_C368-T01_good_130.450
SRR6049663Rhizomagastrodiae_C368-T01_good_133.950
SRR6049664Rhizomagastrodiae_C368-T10_good_135.810
SRR6049665Rhizomagastrodiae_C368-T10_good_135.810
SRP279888GastroGastrodia elata tuber 39.32
JuvenJuvenile tuber34.84
Mother_GastroMother tuber of Gastrodia elata 48.39
Mother_JuvenMother tuber of Juvenile 57.88