Detail information of GWHGAAEX013471/evm.TU.scaffold_50.80


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG30005.00E-112Microtubule-binding protein involved in cell cycle control
nrgi|743839715|ref|XP_010937077.1|1.35E-135PREDICTED: microtubule-associated protein RP/EB family member 1B-like [Elaeis guineensis]
Swissprottr|Q9FJJ5|EB1B_ARATH1.00E-112Microtubule-associated protein RP/EB family member 1B
trEMBLtr|B9I2Z5|B9I2Z5_POPTR2.00E-123Microtubule-associated EB1 family protein {ECO:0000313|EMBL:EEE96824.2}
TAIRAT5G625005.00E-112end binding protein 1B

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005317061281712258+
Transcript Sequence

Network for GWHGAAEX013471

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00307.30CH181163.30E-11
PF03271.16EB12012395.00E-17
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0008017Molecular Functionmicrotubule binding
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms6.170
SRR2545915Juvenile tuber8.910
SRP108465SRR5643513five period of Gastrodia elata15.350
SRR5643514five period of Gastrodia elata33.950
SRR5643515five period of Gastrodia elata20.490
SRR5643524five period of Gastrodia elata31.560
SRR5643525five period of Gastrodia elata15.960
SRR5643528five period of Gastrodia elata11.820
SRR5643658five period of Gastrodia elata9.940
SRR5643659five period of Gastrodia elata12.220
SRR5643660five period of Gastrodia elata11.240
SRR5643661five period of Gastrodia elata10.490
SRR5643662five period of Gastrodia elata6.660
SRR5643663five period of Gastrodia elata5.540
SRR5643664five period of Gastrodia elata4.140
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_121.220
SRR6049655Rhizomagastrodiae_C368-T10_good_137.420
SRR6049656Rhizomagastrodiae_C368-T07_good_131.710
SRR6049657Rhizomagastrodiae_C368-T07_good_112.190
SRR6049658Rhizomagastrodiae_C368-T04_good_114.620
SRR6049659Rhizomagastrodiae_C368-T04_good_110.630
SRR6049660Rhizomagastrodiae_C368-T01_good_116.860
SRR6049661Rhizomagastrodiae_C368-T04_good_112.550
SRR6049662Rhizomagastrodiae_C368-T01_good_127.380
SRR6049663Rhizomagastrodiae_C368-T01_good_127.070
SRR6049664Rhizomagastrodiae_C368-T10_good_146.370
SRR6049665Rhizomagastrodiae_C368-T10_good_146.370
SRP279888GastroGastrodia elata tuber 4.25
JuvenJuvenile tuber28.87
Mother_GastroMother tuber of Gastrodia elata 9.39
Mother_JuvenMother tuber of Juvenile 9.98