Detail information of GWHGAAEX013473/evm.TU.scaffold_50.82


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG33294.00E-74RAN guanine nucleotide release factor
nrgi|698518347|ref|XP_009804047.1|1.40E-100PREDICTED: ran guanine nucleotide release factor isoform X1 [Nicotiana sylvestris]
trEMBLtr|A0A059D8B4|A0A059D8B4_EUCGR2.00E-99Uncharacterized protein {ECO:0000313|EMBL:KCW86832.1}
TAIRAT1G696804.00E-74Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005317219121745468-
Transcript Sequence

Network for GWHGAAEX013473

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04603.11Mog1101501.10E-34
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms15.360
SRR2545915Juvenile tuber13.380
SRP108465SRR5643513five period of Gastrodia elata20.960
SRR5643514five period of Gastrodia elata25.360
SRR5643515five period of Gastrodia elata20.580
SRR5643524five period of Gastrodia elata24.930
SRR5643525five period of Gastrodia elata21.040
SRR5643528five period of Gastrodia elata15.530
SRR5643658five period of Gastrodia elata18.920
SRR5643659five period of Gastrodia elata16.400
SRR5643660five period of Gastrodia elata16.280
SRR5643661five period of Gastrodia elata18.170
SRR5643662five period of Gastrodia elata13.150
SRR5643663five period of Gastrodia elata15.630
SRR5643664five period of Gastrodia elata16.070
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_118.440
SRR6049655Rhizomagastrodiae_C368-T10_good_19.760
SRR6049656Rhizomagastrodiae_C368-T07_good_116.230
SRR6049657Rhizomagastrodiae_C368-T07_good_116.740
SRR6049658Rhizomagastrodiae_C368-T04_good_117.930
SRR6049659Rhizomagastrodiae_C368-T04_good_114.730
SRR6049660Rhizomagastrodiae_C368-T01_good_116.430
SRR6049661Rhizomagastrodiae_C368-T04_good_118.470
SRR6049662Rhizomagastrodiae_C368-T01_good_116.840
SRR6049663Rhizomagastrodiae_C368-T01_good_117.050
SRR6049664Rhizomagastrodiae_C368-T10_good_115.430
SRR6049665Rhizomagastrodiae_C368-T10_good_115.430
SRP279888GastroGastrodia elata tuber 23.54
JuvenJuvenile tuber18.28
Mother_GastroMother tuber of Gastrodia elata 25.90
Mother_JuvenMother tuber of Juvenile 21.79