Detail information of GWHGAAEX013487/evm.TU.scaffold_50.98


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG13031.00E-129Amino acid transporters
nrgi|695039618|ref|XP_009407353.1|1.54E-173PREDICTED: vacuolar amino acid transporter 1-like [Musa acuminata subsp. malaccensis]
Swissprottr|O22719|LHTL3_ARATH9.00E-21Lysine histidine transporter-like 3
trEMBLtr|M0TCY7|M0TCY7_MUSAM6.00E-174Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P35440_001}
TAIRAT5G152401.00E-129Transmembrane amino acid transporter family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005320150292020403-
Transcript Sequence

Network for GWHGAAEX013487

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module6

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01490.17Aa_trans324111.50E-64
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K15015SLC32A, VGAT GABAergic synapse map04727
Retrograde endocannabinoid signalingmap04723
Synaptic vesicle cyclemap04721

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms103.310
SRR2545915Juvenile tuber70.090
SRP108465SRR5643513five period of Gastrodia elata42.240
SRR5643514five period of Gastrodia elata45.480
SRR5643515five period of Gastrodia elata40.190
SRR5643524five period of Gastrodia elata50.780
SRR5643525five period of Gastrodia elata32.060
SRR5643528five period of Gastrodia elata45.940
SRR5643658five period of Gastrodia elata41.520
SRR5643659five period of Gastrodia elata14.220
SRR5643660five period of Gastrodia elata14.360
SRR5643661five period of Gastrodia elata17.740
SRR5643662five period of Gastrodia elata13.770
SRR5643663five period of Gastrodia elata14.900
SRR5643664five period of Gastrodia elata15.450
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_157.310
SRR6049655Rhizomagastrodiae_C368-T10_good_141.350
SRR6049656Rhizomagastrodiae_C368-T07_good_161.380
SRR6049657Rhizomagastrodiae_C368-T07_good_197.440
SRR6049658Rhizomagastrodiae_C368-T04_good_199.140
SRR6049659Rhizomagastrodiae_C368-T04_good_1140.100
SRR6049660Rhizomagastrodiae_C368-T01_good_194.970
SRR6049661Rhizomagastrodiae_C368-T04_good_1126.520
SRR6049662Rhizomagastrodiae_C368-T01_good_143.150
SRR6049663Rhizomagastrodiae_C368-T01_good_143.480
SRR6049664Rhizomagastrodiae_C368-T10_good_137.550
SRR6049665Rhizomagastrodiae_C368-T10_good_137.550
SRP279888GastroGastrodia elata tuber 37.55
JuvenJuvenile tuber81.48
Mother_GastroMother tuber of Gastrodia elata 26.53
Mother_JuvenMother tuber of Juvenile 31.12