Detail information of GWHGAAEX013495/evm.TU.scaffold_50.105


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672165365|ref|XP_008802582.1|3.30E-82PREDICTED: myb family transcription factor APL-like isoform X2 [Phoenix dactylifera]
Swissprottr|Q9SAK5|APL_ARATH3.00E-44Myb family transcription factor APL
trEMBLtr|W9SPH9|W9SPH9_9ROSA1.00E-61Myb family transcription factor APL {ECO:0000313|EMBL:EXC19989.1}
TAIRAT3G040302.00E-57Homeodomain-like superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005321974442200245-
Transcript Sequence

Network for GWHGAAEX013495

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00249.30Myb_DNA-binding10618.50E-07
PF14379.5Myb_CC_LHEQLE991392.00E-17
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyGARP-G2-like

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms26.240
SRR2545915Juvenile tuber20.700
SRP108465SRR5643513five period of Gastrodia elata16.520
SRR5643514five period of Gastrodia elata34.060
SRR5643515five period of Gastrodia elata15.270
SRR5643524five period of Gastrodia elata32.800
SRR5643525five period of Gastrodia elata78.860
SRR5643528five period of Gastrodia elata93.810
SRR5643658five period of Gastrodia elata60.070
SRR5643659five period of Gastrodia elata11.030
SRR5643660five period of Gastrodia elata7.710
SRR5643661five period of Gastrodia elata8.160
SRR5643662five period of Gastrodia elata9.510
SRR5643663five period of Gastrodia elata10.110
SRR5643664five period of Gastrodia elata10.610
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_110.190
SRR6049655Rhizomagastrodiae_C368-T10_good_135.010
SRR6049656Rhizomagastrodiae_C368-T07_good_112.210
SRR6049657Rhizomagastrodiae_C368-T07_good_111.640
SRR6049658Rhizomagastrodiae_C368-T04_good_113.190
SRR6049659Rhizomagastrodiae_C368-T04_good_112.200
SRR6049660Rhizomagastrodiae_C368-T01_good_115.560
SRR6049661Rhizomagastrodiae_C368-T04_good_113.830
SRR6049662Rhizomagastrodiae_C368-T01_good_117.540
SRR6049663Rhizomagastrodiae_C368-T01_good_110.980
SRR6049664Rhizomagastrodiae_C368-T10_good_116.420
SRR6049665Rhizomagastrodiae_C368-T10_good_116.420
SRP279888GastroGastrodia elata tuber 26.71
JuvenJuvenile tuber23.74
Mother_GastroMother tuber of Gastrodia elata 13.44
Mother_JuvenMother tuber of Juvenile 5.66