Detail information of GWHGAAEX013498/evm.TU.scaffold_50.110


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG46356.00E-82Vacuolar import and degradation protein
nrgi|672163508|ref|XP_008801605.1|3.33E-138PREDICTED: glucose-induced degradation protein 4 homolog isoform X2 [Phoenix dactylifera]
trEMBLtr|A5C6Z4|A5C6Z4_VITVI4.00E-132Putative uncharacterized protein {ECO:0000313|EMBL:CAN77671.1}
TAIRAT2G376806.00E-82Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005322728832292079+
Transcript Sequence

Network for GWHGAAEX013498

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF09783.8Vac_ImportDeg311993.10E-47
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms9.870
SRR2545915Juvenile tuber11.820
SRP108465SRR5643513five period of Gastrodia elata9.720
SRR5643514five period of Gastrodia elata8.720
SRR5643515five period of Gastrodia elata11.720
SRR5643524five period of Gastrodia elata8.760
SRR5643525five period of Gastrodia elata15.640
SRR5643528five period of Gastrodia elata11.590
SRR5643658five period of Gastrodia elata15.330
SRR5643659five period of Gastrodia elata10.380
SRR5643660five period of Gastrodia elata12.010
SRR5643661five period of Gastrodia elata10.130
SRR5643662five period of Gastrodia elata11.310
SRR5643663five period of Gastrodia elata12.750
SRR5643664five period of Gastrodia elata11.550
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_16.900
SRR6049655Rhizomagastrodiae_C368-T10_good_16.480
SRR6049656Rhizomagastrodiae_C368-T07_good_17.490
SRR6049657Rhizomagastrodiae_C368-T07_good_17.720
SRR6049658Rhizomagastrodiae_C368-T04_good_16.650
SRR6049659Rhizomagastrodiae_C368-T04_good_15.370
SRR6049660Rhizomagastrodiae_C368-T01_good_17.090
SRR6049661Rhizomagastrodiae_C368-T04_good_16.360
SRR6049662Rhizomagastrodiae_C368-T01_good_16.780
SRR6049663Rhizomagastrodiae_C368-T01_good_17.490
SRR6049664Rhizomagastrodiae_C368-T10_good_18.200
SRR6049665Rhizomagastrodiae_C368-T10_good_18.200
SRP279888GastroGastrodia elata tuber 16.50
JuvenJuvenile tuber13.27
Mother_GastroMother tuber of Gastrodia elata 17.02
Mother_JuvenMother tuber of Juvenile 14.99