Detail information of GWHGAAEX013505/evm.TU.scaffold_50.119


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|319957749|ref|YP_004169012.1|9.00E-11heat shock protein hsp20 [Nitratifractor salsuginis DSM 16511]
KOGKOG07102.00E-48Molecular chaperone (small heat-shock protein Hsp26/Hsp42)
nrgi|299891471|gb|ADJ57588.1|5.04E-62mitochondrial small heat shock protein [Capsicum annuum]
Swissprottr|P11890|HS23C_OXYRB2.00E-59Small heat shock protein, chloroplastic (Precursor)
trEMBLtr|D9IAX1|D9IAX1_CAPAN2.00E-62Mitochondrial small heat shock protein {ECO:0000313|EMBL:ADJ57588.1}
TAIRAT5G514402.00E-48HSP20-like chaperones superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005325326342533364+
Transcript Sequence

Network for GWHGAAEX013505

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module8

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00011.20HSP201172043.80E-15
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K13993HSP20 Protein processing in endoplasmic reticulum map04141

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms269.480
SRR2545915Juvenile tuber3046.220
SRP108465SRR5643513five period of Gastrodia elata33.550
SRR5643514five period of Gastrodia elata19.020
SRR5643515five period of Gastrodia elata64.450
SRR5643524five period of Gastrodia elata23.750
SRR5643525five period of Gastrodia elata819.640
SRR5643528five period of Gastrodia elata994.940
SRR5643658five period of Gastrodia elata38.340
SRR5643659five period of Gastrodia elata445.400
SRR5643660five period of Gastrodia elata550.320
SRR5643661five period of Gastrodia elata367.130
SRR5643662five period of Gastrodia elata164.250
SRR5643663five period of Gastrodia elata141.310
SRR5643664five period of Gastrodia elata267.300
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1102.370
SRR6049655Rhizomagastrodiae_C368-T10_good_155.520
SRR6049656Rhizomagastrodiae_C368-T07_good_163.320
SRR6049657Rhizomagastrodiae_C368-T07_good_180.610
SRR6049658Rhizomagastrodiae_C368-T04_good_157.600
SRR6049659Rhizomagastrodiae_C368-T04_good_170.100
SRR6049660Rhizomagastrodiae_C368-T01_good_153.360
SRR6049661Rhizomagastrodiae_C368-T04_good_164.690
SRR6049662Rhizomagastrodiae_C368-T01_good_159.010
SRR6049663Rhizomagastrodiae_C368-T01_good_155.850
SRR6049664Rhizomagastrodiae_C368-T10_good_146.300
SRR6049665Rhizomagastrodiae_C368-T10_good_146.300
SRP279888GastroGastrodia elata tuber 54.46
JuvenJuvenile tuber60.70
Mother_GastroMother tuber of Gastrodia elata 245.29
Mother_JuvenMother tuber of Juvenile 197.61