Detail information of GWHGAAEX013526/evm.TU.scaffold_50.143


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|17545218|ref|NP_518620.1|5.00E-41phosphoglycerate mutase [Ralstonia solanacearum GMI1000]
KOGKOG02351.00E-79Phosphoglycerate mutase
nrgi|743877302|ref|XP_010907875.1|9.58E-101PREDICTED: phosphoglycerate mutase-like protein 4 [Elaeis guineensis]
Swissprottr|Q9SCS3|PGML4_ARATH4.00E-80Phosphoglycerate mutase-like protein 4 {ECO:0000305}
trEMBLtr|M0TH29|M0TH29_MUSAM2.00E-94Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr7P12920_001}
TAIRAT3G505201.00E-79Phosphoglycerate mutase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005329883453021899+
Transcript Sequence

Network for GWHGAAEX013526

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00300.21His_Phos_1172124.30E-55
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K15634gpmB Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Microbial metabolism in diverse environmentsmap01120
Biosynthesis of antibioticsmap01130
Carbon metabolismmap01200
Biosynthesis of amino acidsmap01230
Glycolysis / Gluconeogenesismap00010
Methane metabolismmap00680
Pyrimidine metabolismmap00240

Gene Ontology

GO term OntologyName
GO:0003824Molecular Functioncatalytic activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms26.770
SRR2545915Juvenile tuber30.470
SRP108465SRR5643513five period of Gastrodia elata27.930
SRR5643514five period of Gastrodia elata27.880
SRR5643515five period of Gastrodia elata27.070
SRR5643524five period of Gastrodia elata27.620
SRR5643525five period of Gastrodia elata17.390
SRR5643528five period of Gastrodia elata11.890
SRR5643658five period of Gastrodia elata10.890
SRR5643659five period of Gastrodia elata30.890
SRR5643660five period of Gastrodia elata28.770
SRR5643661five period of Gastrodia elata30.940
SRR5643662five period of Gastrodia elata26.690
SRR5643663five period of Gastrodia elata26.700
SRR5643664five period of Gastrodia elata26.280
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_135.400
SRR6049655Rhizomagastrodiae_C368-T10_good_141.110
SRR6049656Rhizomagastrodiae_C368-T07_good_133.070
SRR6049657Rhizomagastrodiae_C368-T07_good_135.380
SRR6049658Rhizomagastrodiae_C368-T04_good_140.860
SRR6049659Rhizomagastrodiae_C368-T04_good_148.780
SRR6049660Rhizomagastrodiae_C368-T01_good_134.260
SRR6049661Rhizomagastrodiae_C368-T04_good_135.020
SRR6049662Rhizomagastrodiae_C368-T01_good_134.290
SRR6049663Rhizomagastrodiae_C368-T01_good_135.060
SRR6049664Rhizomagastrodiae_C368-T10_good_136.780
SRR6049665Rhizomagastrodiae_C368-T10_good_136.780
SRP279888GastroGastrodia elata tuber 33.47
JuvenJuvenile tuber25.81
Mother_GastroMother tuber of Gastrodia elata 27.98
Mother_JuvenMother tuber of Juvenile 25.01