Gene detail

Detail information of GWHGAAEX013527/evm.TU.scaffold_50.144

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG4585	4.00E-113	Predicted transposase
nr	gi\|695044816\|ref\|XP_009410176.1\|	6.69E-136	PREDICTED: uncharacterized protein LOC103992267 [Musa acuminata subsp. malaccensis]
trEMBL	tr\|W1NMR1\|W1NMR1_AMBTC	2.00E-127	Uncharacterized protein {ECO:0000313\|EMBL:ERM96831.1}
TAIR	AT3G19120	4.00E-113	PIF / Ping-Pong family of plant transposases

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000053	3028922	3031499	-

Transcript Sequence
>GWHTAAEX013527 ATGCCACAGTAACGAGCTGAAAGTAAGATCTATAAATATGCCATAGTAACTGGTTCGCCTTCTTCTTCCCAGGCTGCCGTCCGCTGTGTTACATCCATTCCCCATCCATCGCCGGCAACGAGCTCAGCCTTTGCTTACACGCTAAATCACTGAATTTCACAGCTTCATCCCTCCTACATAGATGGATCCCGCGCTCCTTCTTCTTCTATCCAACCTCCTCCAGCTGCAGTCCCAACTCGATCCCGCGGCCTCTCTCCTCTCTTCCCCTCCTTCCTCCCCTTCTTCCCTCCTTTCCCCCTCTGCATCTCCCTTCCTCTTCTTCGCGCTCACTTCCGTTCTTTCCTATGCTTCTTCCGCCGTCTCTCCTTCCTACCTATCGCCTCGCCGGAAACGTAGGCGATCCTCATCTTCTTCCTCCCCTTCTCCTCCCCCTCTCCCTATTCCTCCCTCTTCCTCCTCCCTCATTCTAACCCTGCCTTCCGACCGCAGCATCTTCTCCATGGATCCATCCGCCCGTGATTCCCGCTTCCGATCCCTTTACGGCCTCTCCTACACCGTTTTCGCGTCGCTCCTCGATCAACTCCTCCCTCTTCTTCCCTCTCTTTCCCTCCCTCTAGCTCCCGACCAAACCCTAGCTATTGCCCTCTCCCGCCTTTCCCGTGGAATTTCCTCCCGCGCTCTTTCTCGCCTTCTCCATACTCATCTCCCCCCTTCACTCATCTCCCGCGTCACCCATGCCCTAACCCGCCTGCTATCCACCCGCCTATATTCCGATCACGTCAAGCTCCCGTCTCACCACCGCTTGATCCAATCCACCTCCGCTTTCCGCGACATCTCCTCCCTTCCCAACCTGGCTGCCACTATCGCTTCATCCCCTGTTCGCCTTCGCGATTCCACCGATCCATCCCTCCGCTCTCCCCACCGCTCTTTCCCTTCCATTCTTCTCCAAGTTGTCGCGGATCACCGCAAGATCTTCCTCGATGCGTGCGTTCGATCCCCCGGATCATCCGATCCCGCATCGCATCTGCGAGATTCCTCACTCTACCGTCGCCTCTGCAGCTCCGATCTCCTCCGCGACCCTTCCATTCATGTCGGAGGCCACATCGTGCGCCCCTTCTTTGCCGGAGACTCCTCCTTTCCTCTCCTTCCTTTCCTCATCACGCCGTTCTCATCCGTATCTTCCTCCGCAGCTGCCCAAGAGGCTTTTGACGCTGCTCTTGCTAAGGCTAGTTCCGCTTCTGTTGAGCCCGCCATTGCTCTTCTTAAGGGAAGGTGGAAGATACTGAGGAACCTTAATGTGGGGCTCGACCATGCCGCTCAGACTGTGGTGGCATGTGTAGTGTTGCATAACTTCTGCCAGACTTCTGGGGAGCCGGAGGATGAAGGGAAGTACCTGTGGAGGGATCCACCGGAGATTCCACAGCCAGCTCGCCCGGTGGATAGTGAAATGGCTTTGTACTATGCTGGGGAGACTGTGAGACAAGCGCTCACTGAGGATTTGTTCGAGAGGCAACAGCGGCTCTCAGATGGTTCCGCTTCAAGGTAATATTGTATTTGCTTATTCCCTTGTTGATTTTTTGTTTGCTGAGAAGAATCAACAGTCGAAGGATCTAGGAATTGAACTAAAGGTCCTTCATTTACCACCTTGTAAAATGTAAGTTTATTTGTCTCGTTTTAAAATGATAATCTTGATTTCATATTACCAACCGGTAGCATTTAGCCGTTCCTGTTCAATCTTTTGCATAATAGAGCCAAGTTGTTTGTCCTTCTCCAGGTGTTGTAAATGCGCTTCAAATTGTGAATTATACATGTACTATATGTAACTTTTCAATTTTAATTTTAGTGAATTAAGCTCAATCTAAAGGGAATGCCATGGAATGTGAAAACTCTTAAGATGTTGTGGTGGACACTAAGACTTGGAATTGAGACCATTGTTCAAGTCAATTGCTTGAAAGTTATTGTTTACGAGTTGTTTCAGCTGTTGTTCTTGTAAGAGTTGTCTTGGCTTGTTTTTCACATATGTATGATGTGCTATTTACATGGATGAAGGGGTAATTTTGACTTAAAAGCTATGGTTCAAGATGTGTATGGCAACCATGCACTTGTATTCTGAAATGAGTGCTGGCACAATGCACTCTTACAAATATTTCTTGCAAAAGCAAGAGCAGGGGACAAAGTGTAATATAGGTGTTGCCCTTTGCATTATTTCTTGGGGTACCTCATTATTTTTTCCTTTTCTCCCCTCTTTTGTATAATTTTTGTGAAGTTTTTGGGGGCATCATAGAGTAATCCTCCTATAATTTGTATTTTGTTTGACACTACATTCCACTGTCCGTTTTTTGTGAACAATGATTAAGTCTGATTTATGAGATTCATGCTAGAGAGCTGATAATTACTAAAATTTTATTTGCTTCTTATGTCTTATTTTGTTTTTGCTATGTGATAGAAATATTGCACACACAACCAATTAATTCACTCTTTTGCTAACTTTTTCATTTAGCCTGTGATTCAATATTTTATCATCTATGTATAGGTCTGAACCATTGTTTTCACTGTAACAGTAGATGTAAATCAAGTT

Network for GWHGAAEX013527

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF13359.5	DDE_Tnp_4	247	390	7.80E-15

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	7.500
SRP064423	SRR2545915	Juvenile tuber	15.070
SRP108465	SRR5643513	five period of Gastrodia elata	19.710
	SRR5643514	five period of Gastrodia elata	23.640
	SRR5643515	five period of Gastrodia elata	22.290
	SRR5643524	five period of Gastrodia elata	23.280
	SRR5643525	five period of Gastrodia elata	28.840
	SRR5643528	five period of Gastrodia elata	23.850
	SRR5643658	five period of Gastrodia elata	27.190
	SRR5643659	five period of Gastrodia elata	22.220
	SRR5643660	five period of Gastrodia elata	21.040
	SRR5643661	five period of Gastrodia elata	28.830
	SRR5643662	five period of Gastrodia elata	32.120
	SRR5643663	five period of Gastrodia elata	26.050
	SRR5643664	five period of Gastrodia elata	29.000
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	19.470
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	35.630
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	25.240
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	19.370
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	22.310
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	25.580
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	24.830
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	23.820
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	19.600
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	23.580
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	17.530
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	17.530
SRP279888	Gastro	Gastrodia elata tuber	23.58
	Juven	Juvenile tuber	17.33
	Mother_Gastro	Mother tuber of Gastrodia elata	25.10
	Mother_Juven	Mother tuber of Juvenile	18.20