Detail information of GWHGAAEX013533/evm.TU.scaffold_50.152


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|433609169|ref|YP_007041538.1|8.00E-06Protein serine/threonine phosphatase [Saccharothrix espanaensis DSM 44229]
KOGKOG06980Serine/threonine protein phosphatase
nrgi|672149331|ref|XP_008797258.1|0PREDICTED: probable protein phosphatase 2C 12 isoform X2 [Phoenix dactylifera]
Swissprottr|Q9FX08|P2C12_ARATH0Probable protein phosphatase 2C 12
trEMBLtr|M0RL90|M0RL90_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr10P25160_001}
TAIRAT1G473800Protein phosphatase 2C family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005331789133207048+
Transcript Sequence

Network for GWHGAAEX013533

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00481.20PP2C652655.70E-28
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003824Molecular Functioncatalytic activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms20.780
SRR2545915Juvenile tuber21.360
SRP108465SRR5643513five period of Gastrodia elata20.240
SRR5643514five period of Gastrodia elata27.180
SRR5643515five period of Gastrodia elata26.640
SRR5643524five period of Gastrodia elata26.240
SRR5643525five period of Gastrodia elata35.960
SRR5643528five period of Gastrodia elata63.880
SRR5643658five period of Gastrodia elata53.020
SRR5643659five period of Gastrodia elata16.170
SRR5643660five period of Gastrodia elata14.970
SRR5643661five period of Gastrodia elata12.900
SRR5643662five period of Gastrodia elata16.880
SRR5643663five period of Gastrodia elata16.440
SRR5643664five period of Gastrodia elata13.420
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_122.330
SRR6049655Rhizomagastrodiae_C368-T10_good_119.990
SRR6049656Rhizomagastrodiae_C368-T07_good_120.480
SRR6049657Rhizomagastrodiae_C368-T07_good_115.100
SRR6049658Rhizomagastrodiae_C368-T04_good_121.920
SRR6049659Rhizomagastrodiae_C368-T04_good_122.040
SRR6049660Rhizomagastrodiae_C368-T01_good_117.760
SRR6049661Rhizomagastrodiae_C368-T04_good_118.800
SRR6049662Rhizomagastrodiae_C368-T01_good_122.300
SRR6049663Rhizomagastrodiae_C368-T01_good_121.420
SRR6049664Rhizomagastrodiae_C368-T10_good_128.660
SRR6049665Rhizomagastrodiae_C368-T10_good_128.660
SRP279888GastroGastrodia elata tuber 17.13
JuvenJuvenile tuber12.67
Mother_GastroMother tuber of Gastrodia elata 55.89
Mother_JuvenMother tuber of Juvenile 14.09