Detail information of GWHGAAEX013535/evm.TU.scaffold_50.155


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG00275.00E-10Calmodulin and related proteins (EF-Hand superfamily)
nrgi|743860526|ref|XP_010943034.1|4.02E-35PREDICTED: polcalcin Phl p 7-like [Elaeis guineensis]
Swissprottr|Q0DJV6|CML18_ORYSJ3.00E-10Probable calcium-binding protein CML18
trEMBLtr|I1IQR6|I1IQR6_BRADI2.00E-34Uncharacterized protein {ECO:0000313|EnsemblPlants:BRADI4G32190.1}
TAIRCE019085.00E-10Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005332964913296823-
Transcript Sequence

Network for GWHGAAEX013535

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13202.5EF-hand_536573.00E-08
PF13202.5EF-hand_574890.025
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005509Molecular Functioncalcium ion binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms36.270
SRR2545915Juvenile tuber14.390
SRP108465SRR5643513five period of Gastrodia elata88.380
SRR5643514five period of Gastrodia elata60.560
SRR5643515five period of Gastrodia elata45.410
SRR5643524five period of Gastrodia elata28.860
SRR5643525five period of Gastrodia elata805.780
SRR5643528five period of Gastrodia elata534.230
SRR5643658five period of Gastrodia elata552.320
SRR5643659five period of Gastrodia elata14.800
SRR5643660five period of Gastrodia elata19.110
SRR5643661five period of Gastrodia elata12.250
SRR5643662five period of Gastrodia elata19.000
SRR5643663five period of Gastrodia elata5.950
SRR5643664five period of Gastrodia elata26.140
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1118.190
SRR6049655Rhizomagastrodiae_C368-T10_good_157.940
SRR6049656Rhizomagastrodiae_C368-T07_good_1106.790
SRR6049657Rhizomagastrodiae_C368-T07_good_1114.110
SRR6049658Rhizomagastrodiae_C368-T04_good_180.870
SRR6049659Rhizomagastrodiae_C368-T04_good_167.900
SRR6049660Rhizomagastrodiae_C368-T01_good_174.210
SRR6049661Rhizomagastrodiae_C368-T04_good_190.180
SRR6049662Rhizomagastrodiae_C368-T01_good_181.460
SRR6049663Rhizomagastrodiae_C368-T01_good_1101.090
SRR6049664Rhizomagastrodiae_C368-T10_good_1108.310
SRR6049665Rhizomagastrodiae_C368-T10_good_1108.310
SRP279888GastroGastrodia elata tuber 47.41
JuvenJuvenile tuber17.37
Mother_GastroMother tuber of Gastrodia elata 108.32
Mother_JuvenMother tuber of Juvenile 20.67