Detail information of GWHGAAEX013536/evm.TU.scaffold_50.156


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743848721|ref|XP_010939432.1|1.83E-104PREDICTED: protein TIC 22, chloroplastic-like isoform X1 [Elaeis guineensis]
Swissprottr|Q9SZB2|TIC22_ARATH6.00E-96Protein TIC 22, chloroplastic (Precursor)
trEMBLtr|M0TBJ6|M0TBJ6_MUSAM4.00E-102Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P30510_001}
TAIRAT4G333502.00E-95Tic22-like family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005333381593371911+
Transcript Sequence

Network for GWHGAAEX013536

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04278.11Tic22162469.60E-86
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0015031Biological Processprotein transport

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms3.810
SRR2545915Juvenile tuber5.190
SRP108465SRR5643513five period of Gastrodia elata8.230
SRR5643514five period of Gastrodia elata12.260
SRR5643515five period of Gastrodia elata7.740
SRR5643524five period of Gastrodia elata10.360
SRR5643525five period of Gastrodia elata7.170
SRR5643528five period of Gastrodia elata8.470
SRR5643658five period of Gastrodia elata5.790
SRR5643659five period of Gastrodia elata8.790
SRR5643660five period of Gastrodia elata8.560
SRR5643661five period of Gastrodia elata8.920
SRR5643662five period of Gastrodia elata7.060
SRR5643663five period of Gastrodia elata6.970
SRR5643664five period of Gastrodia elata6.290
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_17.310
SRR6049655Rhizomagastrodiae_C368-T10_good_117.270
SRR6049656Rhizomagastrodiae_C368-T07_good_110.310
SRR6049657Rhizomagastrodiae_C368-T07_good_15.520
SRR6049658Rhizomagastrodiae_C368-T04_good_15.110
SRR6049659Rhizomagastrodiae_C368-T04_good_13.870
SRR6049660Rhizomagastrodiae_C368-T01_good_16.000
SRR6049661Rhizomagastrodiae_C368-T04_good_16.610
SRR6049662Rhizomagastrodiae_C368-T01_good_113.340
SRR6049663Rhizomagastrodiae_C368-T01_good_110.600
SRR6049664Rhizomagastrodiae_C368-T10_good_112.740
SRR6049665Rhizomagastrodiae_C368-T10_good_112.740
SRP279888GastroGastrodia elata tuber 6.21
JuvenJuvenile tuber6.66
Mother_GastroMother tuber of Gastrodia elata 2.59
Mother_JuvenMother tuber of Juvenile 4.36