Detail information of GWHGAAEX013544/evm.TU.scaffold_50.165


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|159900419|ref|YP_001546666.1|7.00E-129class I and II aminotransferase [Herpetosiphon aurantiacus DSM 785]
KOGKOG02570Kynurenine aminotransferase, glutamine transaminase K
nrgi|698471963|ref|XP_009784157.1|0PREDICTED: kynurenine--oxoglutarate transaminase [Nicotiana sylvestris]
Swissprottr|E9L7A5|PAT_PETHY3.00E-48Bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase (Precursor)
trEMBLtr|B9H7C6|B9H7C6_POPTR0Uncharacterized protein {ECO:0000313|EMBL:EEE93618.2}
TAIRAT1G776700Pyridoxal phosphate (PLP)-dependent transferases superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005336455403666161+
Transcript Sequence

Network for GWHGAAEX013544

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00155.20Aminotran_1_21184701.60E-65
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K23977GTK Metabolic pathways map01100
Cysteine and methionine metabolismmap00270

Gene Ontology

GO term OntologyName
GO:0009058Biological Processbiosynthetic process
GO:0003824Molecular Functioncatalytic activity
GO:0030170Molecular Functionpyridoxal phosphate binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms13.390
SRR2545915Juvenile tuber12.420
SRP108465SRR5643513five period of Gastrodia elata62.560
SRR5643514five period of Gastrodia elata58.750
SRR5643515five period of Gastrodia elata47.470
SRR5643524five period of Gastrodia elata55.170
SRR5643525five period of Gastrodia elata61.490
SRR5643528five period of Gastrodia elata59.250
SRR5643658five period of Gastrodia elata49.440
SRR5643659five period of Gastrodia elata52.660
SRR5643660five period of Gastrodia elata54.810
SRR5643661five period of Gastrodia elata60.410
SRR5643662five period of Gastrodia elata53.320
SRR5643663five period of Gastrodia elata50.990
SRR5643664five period of Gastrodia elata50.920
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_164.990
SRR6049655Rhizomagastrodiae_C368-T10_good_178.590
SRR6049656Rhizomagastrodiae_C368-T07_good_175.800
SRR6049657Rhizomagastrodiae_C368-T07_good_154.780
SRR6049658Rhizomagastrodiae_C368-T04_good_145.520
SRR6049659Rhizomagastrodiae_C368-T04_good_142.900
SRR6049660Rhizomagastrodiae_C368-T01_good_149.890
SRR6049661Rhizomagastrodiae_C368-T04_good_151.210
SRR6049662Rhizomagastrodiae_C368-T01_good_177.070
SRR6049663Rhizomagastrodiae_C368-T01_good_166.580
SRR6049664Rhizomagastrodiae_C368-T10_good_1104.740
SRR6049665Rhizomagastrodiae_C368-T10_good_1104.740
SRP279888GastroGastrodia elata tuber 38.97
JuvenJuvenile tuber47.68
Mother_GastroMother tuber of Gastrodia elata 27.29
Mother_JuvenMother tuber of Juvenile 29.81