Detail information of GWHGAAEX013548/evm.TU.scaffold_50.170


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743804951|ref|XP_010927317.1|0PREDICTED: protein CPR-5-like [Elaeis guineensis]
Swissprottr|Q9LV85|CPR5_ARATH1.00E-86Protein CPR-5
trEMBLtr|M0SCI5|M0SCI5_MUSAM3.00E-161Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr3P07180_001}
TAIRAT5G649304.00E-86CPR5 protein, putative

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005337503833757910-
Transcript Sequence

Network for GWHGAAEX013548

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
----------
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms30.350
SRR2545915Juvenile tuber33.030
SRP108465SRR5643513five period of Gastrodia elata19.830
SRR5643514five period of Gastrodia elata18.620
SRR5643515five period of Gastrodia elata15.100
SRR5643524five period of Gastrodia elata17.980
SRR5643525five period of Gastrodia elata14.050
SRR5643528five period of Gastrodia elata15.010
SRR5643658five period of Gastrodia elata14.230
SRR5643659five period of Gastrodia elata20.050
SRR5643660five period of Gastrodia elata23.160
SRR5643661five period of Gastrodia elata22.720
SRR5643662five period of Gastrodia elata26.050
SRR5643663five period of Gastrodia elata19.810
SRR5643664five period of Gastrodia elata27.550
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_127.050
SRR6049655Rhizomagastrodiae_C368-T10_good_118.750
SRR6049656Rhizomagastrodiae_C368-T07_good_123.970
SRR6049657Rhizomagastrodiae_C368-T07_good_130.000
SRR6049658Rhizomagastrodiae_C368-T04_good_123.980
SRR6049659Rhizomagastrodiae_C368-T04_good_126.180
SRR6049660Rhizomagastrodiae_C368-T01_good_124.350
SRR6049661Rhizomagastrodiae_C368-T04_good_123.220
SRR6049662Rhizomagastrodiae_C368-T01_good_118.470
SRR6049663Rhizomagastrodiae_C368-T01_good_123.150
SRR6049664Rhizomagastrodiae_C368-T10_good_122.110
SRR6049665Rhizomagastrodiae_C368-T10_good_122.110
SRP279888GastroGastrodia elata tuber 30.54
JuvenJuvenile tuber30.72
Mother_GastroMother tuber of Gastrodia elata 25.62
Mother_JuvenMother tuber of Juvenile 30.28