Gene detail

Detail information of GWHGAAEX013552/evm.TU.scaffold_50.173

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|672114111\|ref\|XP_008775434.1\|	4.40E-47	PREDICTED: 21 kDa protein-like [Phoenix dactylifera]
Swissprot	tr\|P17407\|21KD_DAUCA	8.00E-26	21 kDa protein (Precursor)
trEMBL	tr\|M0S857\|M0S857_MUSAM	6.00E-45	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr2P15160_001}
TAIR	AT1G14890	3.00E-35	Plant invertase/pectin methylesterase inhibitor superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000053	3801566	3803184	-

Transcript Sequence
>GWHTAAEX013552 CAGACAATGGCCGTTCTTCTGCTCTCCTTTGTCCTCCTCTCCGTTTCTTTCTCGCAGGAGACGATCGCCTCCGTGGCTAATTCCTCTGACTTTATCCGCCAAAGCTGCACTCTAACCCTGTATCCTGAACTCTGCTACACCTCCCTCAGACCCTACGAGGCCGCCGTTCAGCAGAACCCCCTATCTCTCGCCGTCGCAGCGGCTAACGTCAGCCTTTCAAAGATCAAGGAAGCCTCATGTCGTGCTGCGGCTATGCGCCGTCGGAGCACCGGAAGGATCGGATCAGTGCTTCGTGACTGCGTTGAATTGCTCGGAACTGCTGCGGATCAGACGAAACAGGCGGCAGCAGAGATCCAGAAGCTCAGATCTGCAGGATCGTCTGTACCGGCTGACGGTTCTGGAATGGCTTGGCGAGCGTCCAACGCTCAGACGTGGATGAGCGCTGCCATCACCAATGAAGATTCCTGCATCGATGGGTTTCAGGAGATCGACGACAGCGGCGGAGACGGCGCGGCCTTTGCGATCAAGGCGGTTTGTGGTAAGGTTGGGAAAGTAAAGCAGTATTCGAGTAACGCCCTCGCCCTGCTCAATGCCTTTGTACATGGTTGAAGTCTATCTCGGCGGGATCTCTAAGGTACGGTAGATGTTATCTTTGCCGTCATTTTAGTTTGGACGATTCAGATTATCTTAGAAAAAAAAATTTAATCTGCCCTTTTAATCCGCCAAAAATGAATTTCGCGGTTTAATTAACATTCTGCCTTATGGCATAATTACTGATGTAAATAGTAATTTAGAATATTTCAGTTGTAGTTGCAACTTTAAGAAACTGATGGTGGTTATAAGTTTGTGAATTGTAAAAGAAAAGAAAATGATGCGTTGTATTTGTCATCAGCGAATTGGCTTGAATTAAATAATATATTTGGAATTTATGTATAAATTAATTTAAAATCTTTGTATGGTTTAATGATTAAATTTGGAGTTATTTAGAAGGGCATGCTAACGGATCGGTCGTGCACATTCTTTTCGTGAATAACCGAATTTCTTGTGATAACAGATCTTTAGTCTTATATTATTATAATATGTTTCAGTGTTTTAAATATAAATAATGAGGTTTGGACTGTTGTGTAGGTAAAATGTTCATAATTTTAGATCCGTTTAGTGCAGGTGTTCCTACGAGCCCTCAGTTAACTCTAAAACGCTTAAAAATTAGAACAGTAACATGCTTAATTTATTAATTCATAAGTTTAAAATAAAAGCTATTAAAACTGTTGCAACAAATTAAACAGTGGATTAAAAAAATAGTTTTGGATTAAAAAAGTTTATATAAATTAAGACTTTACTGCAAGTTTAGTTCCACTGTTAAAACCGGGATTCCGGCCGGTTAACGGTTAAACCGGTCGAACCCATCTGTCTAATCCGGATTTTAGTTTATTAACTACATTAAAAAATATTATTTTAAAGAGATTTGGCACCCAAAAAATATGAATCTTTTTGAGATATTTAAAAAATATTATTTTTTATAAACAAATATCATTAATCGTTCGTACTAGAAATGAATGGGGTTAACTGTCAATTTGGCGAGATCTACCATCTCTAGTACTTTATAATTTCTAAATGTC

Network for GWHGAAEX013552

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module1

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF04043.14	PMEI	28	193	5.30E-32

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0004857	Molecular Function	enzyme inhibitor activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	2.860
SRP064423	SRR2545915	Juvenile tuber	3.600
SRP108465	SRR5643513	five period of Gastrodia elata	2.310
	SRR5643514	five period of Gastrodia elata	4.570
	SRR5643515	five period of Gastrodia elata	2.660
	SRR5643524	five period of Gastrodia elata	3.780
	SRR5643525	five period of Gastrodia elata	121.110
	SRR5643528	five period of Gastrodia elata	160.570
	SRR5643658	five period of Gastrodia elata	219.310
	SRR5643659	five period of Gastrodia elata	3.120
	SRR5643660	five period of Gastrodia elata	2.050
	SRR5643661	five period of Gastrodia elata	2.320
	SRR5643662	five period of Gastrodia elata	4.190
	SRR5643663	five period of Gastrodia elata	3.010
	SRR5643664	five period of Gastrodia elata	3.980
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	5.080
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	4.850
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	4.910
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	4.130
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	1.430
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	1.830
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	3.690
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	4.580
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	6.020
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	3.980
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	4.220
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	4.220
SRP279888	Gastro	Gastrodia elata tuber	2.58
	Juven	Juvenile tuber	1.13
	Mother_Gastro	Mother tuber of Gastrodia elata	13.83
	Mother_Juven	Mother tuber of Juvenile	2.55