Detail information of GWHGAAEX013559/evm.TU.scaffold_50.181


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672128798|ref|XP_008787890.1|1.08E-101PREDICTED: protein Barley B recombinant-like [Phoenix dactylifera]
Swissprottr|Q9SKD0|BPC1_ARATH1.00E-72Protein BASIC PENTACYSTEINE1
trEMBLtr|A0A068UB08|A0A068UB08_COFCA1.00E-88Coffea canephora
TAIRAT2G019304.00E-72basic pentacysteine1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005339530093954594+
Transcript Sequence

Network for GWHGAAEX013559

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF06217.11GAGA_bind12791.10E-91
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyBBR-BPC

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms140.810
SRR2545915Juvenile tuber122.790
SRP108465SRR5643513five period of Gastrodia elata44.260
SRR5643514five period of Gastrodia elata37.890
SRR5643515five period of Gastrodia elata40.590
SRR5643524five period of Gastrodia elata37.690
SRR5643525five period of Gastrodia elata50.290
SRR5643528five period of Gastrodia elata32.640
SRR5643658five period of Gastrodia elata35.500
SRR5643659five period of Gastrodia elata70.230
SRR5643660five period of Gastrodia elata82.720
SRR5643661five period of Gastrodia elata73.540
SRR5643662five period of Gastrodia elata84.330
SRR5643663five period of Gastrodia elata70.740
SRR5643664five period of Gastrodia elata85.500
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_159.630
SRR6049655Rhizomagastrodiae_C368-T10_good_149.290
SRR6049656Rhizomagastrodiae_C368-T07_good_157.630
SRR6049657Rhizomagastrodiae_C368-T07_good_180.250
SRR6049658Rhizomagastrodiae_C368-T04_good_186.840
SRR6049659Rhizomagastrodiae_C368-T04_good_1104.830
SRR6049660Rhizomagastrodiae_C368-T01_good_181.630
SRR6049661Rhizomagastrodiae_C368-T04_good_187.340
SRR6049662Rhizomagastrodiae_C368-T01_good_153.650
SRR6049663Rhizomagastrodiae_C368-T01_good_168.720
SRR6049664Rhizomagastrodiae_C368-T10_good_133.540
SRR6049665Rhizomagastrodiae_C368-T10_good_133.540
SRP279888GastroGastrodia elata tuber 81.09
JuvenJuvenile tuber39.74
Mother_GastroMother tuber of Gastrodia elata 40.77
Mother_JuvenMother tuber of Juvenile 25.63