Detail information of GWHGAAEX013569/evm.TU.scaffold_50.193


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|470182644|ref|YP_007568519.1|1.00E-74LSU m5C1962 methyltransferase RlmI [Legionella pneumophila subsp. pneumophila str. Philadelphia 1]
nrgi|720015155|ref|XP_010260741.1|0PREDICTED: uncharacterized protein LOC104599755 isoform X1 [Nelumbo nucifera]
trEMBLtr|C5XW61|C5XW61_SORBI0Putative uncharacterized protein Sb04g004900 {ECO:0000313|EMBL:EES04608.1}
TAIRAT1G543100S-adenosyl-L-methionine-dependent methyltransferases superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005341227574134133-
Transcript Sequence

Network for GWHGAAEX013569

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF10672.8Methyltrans_SAM1723485.40E-18
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0003723Molecular FunctionRNA binding
GO:0008168Molecular Functionmethyltransferase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms2.420
SRR2545915Juvenile tuber2.230
SRP108465SRR5643513five period of Gastrodia elata2.170
SRR5643514five period of Gastrodia elata4.100
SRR5643515five period of Gastrodia elata2.710
SRR5643524five period of Gastrodia elata3.550
SRR5643525five period of Gastrodia elata2.210
SRR5643528five period of Gastrodia elata2.880
SRR5643658five period of Gastrodia elata2.990
SRR5643659five period of Gastrodia elata2.240
SRR5643660five period of Gastrodia elata1.880
SRR5643661five period of Gastrodia elata1.810
SRR5643662five period of Gastrodia elata2.340
SRR5643663five period of Gastrodia elata2.410
SRR5643664five period of Gastrodia elata1.460
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_13.060
SRR6049655Rhizomagastrodiae_C368-T10_good_10.960
SRR6049656Rhizomagastrodiae_C368-T07_good_14.570
SRR6049657Rhizomagastrodiae_C368-T07_good_12.530
SRR6049658Rhizomagastrodiae_C368-T04_good_11.820
SRR6049659Rhizomagastrodiae_C368-T04_good_12.430
SRR6049660Rhizomagastrodiae_C368-T01_good_13.800
SRR6049661Rhizomagastrodiae_C368-T04_good_12.980
SRR6049662Rhizomagastrodiae_C368-T01_good_14.310
SRR6049663Rhizomagastrodiae_C368-T01_good_13.800
SRR6049664Rhizomagastrodiae_C368-T10_good_14.550
SRR6049665Rhizomagastrodiae_C368-T10_good_14.550
SRP279888GastroGastrodia elata tuber 3.70
JuvenJuvenile tuber3.58
Mother_GastroMother tuber of Gastrodia elata 1.45
Mother_JuvenMother tuber of Juvenile 1.05