Detail information of GWHGAAEX013570/evm.TU.scaffold_50.195


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672178435|ref|XP_008809349.1|1.19E-146PREDICTED: LOW QUALITY PROTEIN: protein UNUSUAL FLORAL ORGANS [Phoenix dactylifera]
Swissprottr|Q39090|UFO_ARATH4.00E-107Protein UNUSUAL FLORAL ORGANS
trEMBLtr|M0SH79|M0SH79_MUSAM3.00E-122Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr3P23630_001}
TAIRAT1G309501.00E-106F-box family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005341672824169047+
Transcript Sequence

Network for GWHGAAEX013570

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00646.32F-box25599.00E-07
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyF-box

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1.670
SRR2545915Juvenile tuber0.450
SRP108465SRR5643513five period of Gastrodia elata3.310
SRR5643514five period of Gastrodia elata3.180
SRR5643515five period of Gastrodia elata2.960
SRR5643524five period of Gastrodia elata1.920
SRR5643525five period of Gastrodia elata24.180
SRR5643528five period of Gastrodia elata13.770
SRR5643658five period of Gastrodia elata12.330
SRR5643659five period of Gastrodia elata1.040
SRR5643660five period of Gastrodia elata0.650
SRR5643661five period of Gastrodia elata1.150
SRR5643662five period of Gastrodia elata1.530
SRR5643663five period of Gastrodia elata1.180
SRR5643664five period of Gastrodia elata2.740
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_116.540
SRR6049655Rhizomagastrodiae_C368-T10_good_110.080
SRR6049656Rhizomagastrodiae_C368-T07_good_116.650
SRR6049657Rhizomagastrodiae_C368-T07_good_114.210
SRR6049658Rhizomagastrodiae_C368-T04_good_16.990
SRR6049659Rhizomagastrodiae_C368-T04_good_15.890
SRR6049660Rhizomagastrodiae_C368-T01_good_15.390
SRR6049661Rhizomagastrodiae_C368-T04_good_15.500
SRR6049662Rhizomagastrodiae_C368-T01_good_112.220
SRR6049663Rhizomagastrodiae_C368-T01_good_17.080
SRR6049664Rhizomagastrodiae_C368-T10_good_116.890
SRR6049665Rhizomagastrodiae_C368-T10_good_116.890
SRP279888GastroGastrodia elata tuber 3.05
JuvenJuvenile tuber0.66
Mother_GastroMother tuber of Gastrodia elata 2.60
Mother_JuvenMother tuber of Juvenile 0.60