Detail information of GWHGAAEX013583/evm.TU.scaffold_50.211


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|254786684|ref|YP_003074113.1|5.00E-168glyceraldehyde-3-phosphate dehydrogenase [Teredinibacter turnerae T7901]
KOGKOG06570Glyceraldehyde 3-phosphate dehydrogenase
nrgi|743767919|ref|XP_010914235.1|0PREDICTED: glyceraldehyde-3-phosphate dehydrogenase GAPCP2, chloroplastic [Elaeis guineensis]
Swissprottr|Q5E924|G3PP2_ARATH0Glyceraldehyde-3-phosphate dehydrogenase GAPCP2, chloroplastic (Precursor)
trEMBLtr|M0TEE8|M0TEE8_MUSAM0Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}
TAIRAT1G163000glyceraldehyde-3-phosphate dehydrogenase of plastid 2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005346397174667574-
Transcript Sequence

Network for GWHGAAEX013583

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00044.23Gp_dh_N941944.60E-37
PF02800.19Gp_dh_C2474042.40E-67
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K00134GAPDH, gapA Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Microbial metabolism in diverse environmentsmap01120
Biosynthesis of antibioticsmap01130
Carbon metabolismmap01200
Biosynthesis of amino acidsmap01230
Glycolysis / Gluconeogenesismap00010
Carbon fixation in photosynthetic organismsmap00710
HIF-1 signaling pathwaymap04066

Gene Ontology

GO term OntologyName
GO:0006006Biological Processglucose metabolic process
GO:0055114Biological Processoxidation-reduction process
GO:0050661Molecular FunctionNADP binding
GO:0016620Molecular Functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
GO:0051287Molecular FunctionNAD binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms188.760
SRR2545915Juvenile tuber168.160
SRP108465SRR5643513five period of Gastrodia elata152.490
SRR5643514five period of Gastrodia elata137.640
SRR5643515five period of Gastrodia elata157.920
SRR5643524five period of Gastrodia elata132.310
SRR5643525five period of Gastrodia elata209.440
SRR5643528five period of Gastrodia elata217.040
SRR5643658five period of Gastrodia elata215.520
SRR5643659five period of Gastrodia elata163.310
SRR5643660five period of Gastrodia elata182.250
SRR5643661five period of Gastrodia elata155.400
SRR5643662five period of Gastrodia elata172.230
SRR5643663five period of Gastrodia elata204.010
SRR5643664five period of Gastrodia elata182.800
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1188.480
SRR6049655Rhizomagastrodiae_C368-T10_good_1108.940
SRR6049656Rhizomagastrodiae_C368-T07_good_1168.190
SRR6049657Rhizomagastrodiae_C368-T07_good_1233.890
SRR6049658Rhizomagastrodiae_C368-T04_good_1236.590
SRR6049659Rhizomagastrodiae_C368-T04_good_1247.440
SRR6049660Rhizomagastrodiae_C368-T01_good_1212.880
SRR6049661Rhizomagastrodiae_C368-T04_good_1207.660
SRR6049662Rhizomagastrodiae_C368-T01_good_1136.080
SRR6049663Rhizomagastrodiae_C368-T01_good_1151.790
SRR6049664Rhizomagastrodiae_C368-T10_good_1122.010
SRR6049665Rhizomagastrodiae_C368-T10_good_1122.010
SRP279888GastroGastrodia elata tuber 190.94
JuvenJuvenile tuber170.35
Mother_GastroMother tuber of Gastrodia elata 196.38
Mother_JuvenMother tuber of Juvenile 190.85