Gene detail

Detail information of GWHGAAEX013589/evm.TU.scaffold_50.217

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|310825155\|ref\|YP_003957513.1\|	3.00E-97	potassium transport system protein kup [Stigmatella aurantiaca DW4/3-1]
nr	gi\|695073939\|ref\|XP_009384154.1\|	0	PREDICTED: probable potassium transporter 11 [Musa acuminata subsp. malaccensis]
Swissprot	tr\|Q8VXB1\|HAK12_ORYSJ	0	Putative potassium transporter 12
trEMBL	tr\|M0RT96\|M0RT96_MUSAM	0	Potassium transporter {ECO:0000256\|RuleBase:RU321113}
TAIR	AT2G35060	0	K+ uptake permease 11

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000053	4736569	4760884	-

Transcript Sequence
>GWHTAAEX013589 CACTCGAATGAAAAACCCTTGCAAAATCCAACCTCCCACTGATCAGATAATCCGCTTGCGGCTTTTTTGTTCTTCGAGATAGAAAGAAAAAGAATGAAATCCCGTCAATAGAAGCAAAGAAACTCTTCGTCTTAAATTTCAGTTCGTTAAGTTGCATTCGGTGCGATTAGGGTTATTATGGTCTGTTAAACAAGGGGATTACAGGATTTGAGTTTGTGGGTTCTGCTGATTGTGACCGCCAAGGGTTTTGATGGCACCGGCGCCGGTGGAAGATAGTGGAGGAAGCAAAGGAAGCATGTGGGATTTGAACCAGAAGCTTGATCAACCCATGGATGAAGAGGCTAGCAGGATTAGCAATATGTACAGTGAGAAGAAATTTTCATCATTGTTACTTCTAAGGCTTGCATTTCAAAGCTTGGGGGTGGTATTTGGAGATTTGGGTACATCACCTTTGTATGTTTTCTACAACACGTTTCCTCGGGGAGTAGATAATCGTGAAGATATTATTGGAGCTCTTTCTTTAATTATATACTCTCTAACCGTTATCGTACTTCTCAAATATGTTTTTGTGGTTCTGAGAGCAAATGACAATGGTCAAGGAGGCACTTTTGCTCTATACTCGCTGCTCTGTAGACATGCAAAAATAAGGACTATTCCCAACCAGCATAGGACAGATGAAGAGTTAACAACATACAGTTGTCAGACATATGATGAGGGTTCATTTGCAGCTAAACTCAAGCGCTGGTTAGAAGCTCATACATATAAGAAAAATGCTGTTCTTATTCTTGTTCTTATCGGGACTTGCATGGTTATTGGCGATGGAATTTTTACTCCAGCTATTTCAGTTCTCTCAGCAGCTGGTGGAATCAAGATGGACCACCCTAGTATAAGCAATGATGTGGTTATTCTGGTGGCGGTGGTTATTTTGGTCAGTTTGTTTAGCATGCAGCATTATGGCACAGACAGAGTCAGTTGGCTCTTTGCTCCCATCGTTCTTCTCTGGTTCCTGTTAATAGGTGCCATAGGCGCTGTCAACTTGTGCAAATATGACAGTTCAGTTCTCAAAGCCTTTAACCCGCTTCACATAGTTAGATATTTCAAAGGCGGCCGCAAAAATTTGGCTTCCCTGGGAGGAATTCTGCTTAGCATTACAGGAACCGAAGTATTGTACGCTGATCTGTGTCATTTCCCTGTCCTCGCCATTCAGATTGCTTTTACTTTTGTTGTTTTCCCATGTCTCCTTTTGGCATACTCTGGGCAAGCAGCTTACATCATTCAGCACCGAGATCACGTGTTTGATGCATTCTATAAGTCAATTCCAGATGGTATATACTGGCCGATGTTTATCATTGCAACAGCTGCTGCGAGCATTGCTAGCCAAGCCACCATATCTGCAACATTTTCAATCATCAAACAGGCATTTGCTCTTGGCTGTTTCCCAAGGGTTAAGATTGTTCACACATCAAAAAAATTCCTTGGGCAGATATACATTCCTGACATTAATTGGATTCTGATGATCCTCTGCATCTCCATCACCGCCGGGTTCAAAAACCAAAGTCAGATTGGGAATGCTTACGGAACTGCTGTCGTCCTCGTCATGCTGGTCACAACCTTTCTAATGATCCCCATAATGTTCTTGGTATGGCGAAGCCATTGGATCTTCATCGCCTTCTTCACCGCCCTCTCCCTTTTGGTGGAACTCACTTATTTCTCTGCAGTCCTGTTCAAGGTTGACGAGGGCGGATGGGTGCCACTTGTCATTGCCGCCACTTTTCTATTCATCATGTACATTTGGCATTACACCACTGTCAAGCGGTATGAGTTTGAGATGCACTCAAGGGTATCCATTGCTTGGATTCTTGGTTTAGGCCCGAGTCTCGGCCTCGTCAGGGTTCCGGGAATTGGCTTTGTGTACACCGATCTTGCAAGCGGAGTGCCTCACATCTTCTCTCACCTAATTACCAACCTTCCCGCCATCCATTCCGTCGTCGTCTTCGTCTGCGTCAAGTACCTCCCAGTGTATAGCGTACTCGTGGAGGAGCGCGTCCTCGTCAAACGAATCGGCCCGAAAAGCTTTCACATATTTCGGTGCGTCGTAAGATACGGATACAAGGACGCGCTCAGGAGGGATGATGACTTTGAGAAGATGTTGTTTGATAGCATCTCTATCTTCGTTCATCTGGAGGCGATGATGGAGGGTTACTCGGATTCGGACGATTTCACCTTTTCGGTGCTACGGAATGAGAAGTCCGTCGATCTAGTCGAAGCCGAGTATCGGGATAGCACTGCGACGGAGTCTTTAGCCCCCACGACAAGCCAAGTGGGTTGTGAGGAGATCGATTTTTTGAACAGATGCAAGGAGGCCGGAGTGGTGCACATATTGAGCAACGCGATGGTGATGGCTCGAAGGAATTCGTGTCTTGTGAAGAAGATTGCTGTTGATTATGTTTATGCTTTTCTTAGGAGGATTTGCAGAGAGAACAATGTGATGTATAATCTTCCTCATGAGAGTTTGTTGAATGTTGGACAGATAGTGAATGTATAGTTCATACGTGATTAAATTCAAATTAGATTTCTTTTATATCCTCAATGATTCTCAGAATATTATTTCTTTTTTGTTTGGCTTTAAATTTGAAGTATTGTGAATGTTAGATCTGCTGAATGCTTTTCTG

Network for GWHGAAEX013589

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module4

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF02705.15	K_trans	52	622	4.90E-183

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0071805	Biological Process	potassium ion transmembrane transport
GO:0015079	Molecular Function	potassium ion transmembrane transporter activity
GO:0016020	Cellular Component	membrane

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	5.760
SRP064423	SRR2545915	Juvenile tuber	11.140
SRP108465	SRR5643513	five period of Gastrodia elata	8.490
	SRR5643514	five period of Gastrodia elata	10.500
	SRR5643515	five period of Gastrodia elata	11.940
	SRR5643524	five period of Gastrodia elata	16.280
	SRR5643525	five period of Gastrodia elata	18.600
	SRR5643528	five period of Gastrodia elata	33.760
	SRR5643658	five period of Gastrodia elata	22.610
	SRR5643659	five period of Gastrodia elata	7.730
	SRR5643660	five period of Gastrodia elata	6.920
	SRR5643661	five period of Gastrodia elata	8.070
	SRR5643662	five period of Gastrodia elata	14.840
	SRR5643663	five period of Gastrodia elata	10.350
	SRR5643664	five period of Gastrodia elata	13.230
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	7.380
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	9.060
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	7.680
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	7.550
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	8.090
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	8.110
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	10.330
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	7.400
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	11.390
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	11.210
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	6.940
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	6.940
SRP279888	Gastro	Gastrodia elata tuber	18.48
	Juven	Juvenile tuber	8.36
	Mother_Gastro	Mother tuber of Gastrodia elata	45.22
	Mother_Juven	Mother tuber of Juvenile	44.36