Detail information of GWHGAAEX013592/evm.TU.scaffold_50.220


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|427736777|ref|YP_007056321.1|03-phosphoglycerate kinase [Rivularia sp. PCC 7116]
KOGKOG136703-phosphoglycerate kinase
nrgi|743760379|ref|XP_010936568.1|0PREDICTED: phosphoglycerate kinase, cytosolic [Elaeis guineensis]
Swissprottr|P12783|PGKY_WHEAT0Phosphoglycerate kinase, cytosolic
trEMBLtr|M0TVU9|M0TVU9_MUSAM0Phosphoglycerate kinase {ECO:0000256|RuleBase:RU000532}
TAIRAT1G795500phosphoglycerate kinase

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005347956014801644-
Transcript Sequence

Network for GWHGAAEX013592

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00162.18PGK143909.80E-166
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00927PGK, pgk Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Microbial metabolism in diverse environmentsmap01120
Biosynthesis of antibioticsmap01130
Carbon metabolismmap01200
Biosynthesis of amino acidsmap01230
Glycolysis / Gluconeogenesismap00010
Carbon fixation in photosynthetic organismsmap00710
HIF-1 signaling pathwaymap04066

Gene Ontology

GO term OntologyName
GO:0006096Biological Processglycolytic process
GO:0004618Molecular Functionphosphoglycerate kinase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms121.310
SRR2545915Juvenile tuber136.350
SRP108465SRR5643513five period of Gastrodia elata183.700
SRR5643514five period of Gastrodia elata221.560
SRR5643515five period of Gastrodia elata167.320
SRR5643524five period of Gastrodia elata188.140
SRR5643525five period of Gastrodia elata87.480
SRR5643528five period of Gastrodia elata157.650
SRR5643658five period of Gastrodia elata74.740
SRR5643659five period of Gastrodia elata169.980
SRR5643660five period of Gastrodia elata171.030
SRR5643661five period of Gastrodia elata198.800
SRR5643662five period of Gastrodia elata162.290
SRR5643663five period of Gastrodia elata168.680
SRR5643664five period of Gastrodia elata148.860
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1239.560
SRR6049655Rhizomagastrodiae_C368-T10_good_1218.700
SRR6049656Rhizomagastrodiae_C368-T07_good_1270.660
SRR6049657Rhizomagastrodiae_C368-T07_good_1166.910
SRR6049658Rhizomagastrodiae_C368-T04_good_1177.290
SRR6049659Rhizomagastrodiae_C368-T04_good_1143.930
SRR6049660Rhizomagastrodiae_C368-T01_good_1158.490
SRR6049661Rhizomagastrodiae_C368-T04_good_1173.060
SRR6049662Rhizomagastrodiae_C368-T01_good_1348.280
SRR6049663Rhizomagastrodiae_C368-T01_good_1270.760
SRR6049664Rhizomagastrodiae_C368-T10_good_1414.910
SRR6049665Rhizomagastrodiae_C368-T10_good_1414.910
SRP279888GastroGastrodia elata tuber 225.30
JuvenJuvenile tuber215.89
Mother_GastroMother tuber of Gastrodia elata 121.75
Mother_JuvenMother tuber of Juvenile 192.80