Detail information of GWHGAAEX013594/evm.TU.scaffold_50.222


Functional Annotation

DatabaseOrthologsE valueAnnotation

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005348501844851677+
Transcript Sequence

Network for GWHGAAEX013594

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K01681ACO, acnA Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Microbial metabolism in diverse environmentsmap01120
Biosynthesis of antibioticsmap01130
Carbon metabolismmap01200
2-Oxocarboxylic acid metabolismmap01210
Biosynthesis of amino acidsmap01230
Citrate cycle (TCA cycle)map00020
Glyoxylate and dicarboxylate metabolismmap00630
Carbon fixation pathways in prokaryotesmap00720

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms26.800
SRR2545915Juvenile tuber23.930
SRP108465SRR5643513five period of Gastrodia elata29.710
SRR5643514five period of Gastrodia elata39.350
SRR5643515five period of Gastrodia elata32.070
SRR5643524five period of Gastrodia elata33.810
SRR5643525five period of Gastrodia elata48.920
SRR5643528five period of Gastrodia elata23.190
SRR5643658five period of Gastrodia elata21.080
SRR5643659five period of Gastrodia elata24.940
SRR5643660five period of Gastrodia elata29.630
SRR5643661five period of Gastrodia elata23.590
SRR5643662five period of Gastrodia elata19.970
SRR5643663five period of Gastrodia elata15.210
SRR5643664five period of Gastrodia elata22.340
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_129.760
SRR6049655Rhizomagastrodiae_C368-T10_good_144.100
SRR6049656Rhizomagastrodiae_C368-T07_good_129.020
SRR6049657Rhizomagastrodiae_C368-T07_good_124.030
SRR6049658Rhizomagastrodiae_C368-T04_good_122.460
SRR6049659Rhizomagastrodiae_C368-T04_good_121.190
SRR6049660Rhizomagastrodiae_C368-T01_good_120.160
SRR6049661Rhizomagastrodiae_C368-T04_good_115.570
SRR6049662Rhizomagastrodiae_C368-T01_good_117.030
SRR6049663Rhizomagastrodiae_C368-T01_good_123.030
SRR6049664Rhizomagastrodiae_C368-T10_good_134.890
SRR6049665Rhizomagastrodiae_C368-T10_good_134.890
SRP279888GastroGastrodia elata tuber 39.37
JuvenJuvenile tuber78.03
Mother_GastroMother tuber of Gastrodia elata 35.54
Mother_JuvenMother tuber of Juvenile 33.86