Detail information of GWHGAAEX013600/evm.TU.scaffold_50.230


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743804135|ref|XP_010927109.1|6.46E-92PREDICTED: protein FAR1-RELATED SEQUENCE 4-like isoform X3 [Elaeis guineensis]
Swissprottr|Q3E7I5|FRS12_ARATH5.00E-08Protein FAR1-RELATED SEQUENCE 12
trEMBLtr|Q8S7I2|Q8S7I2_ORYSJ4.00E-44Putative transposase {ECO:0000313|EMBL:AAM19033.1}
TAIRAT5G189602.00E-07FAR1-related sequence 12

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005349966854999957-
Transcript Sequence

Network for GWHGAAEX013600

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03101.14FAR1911212.20E-05
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyFAR1

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms9.110
SRR2545915Juvenile tuber5.970
SRP108465SRR5643513five period of Gastrodia elata10.820
SRR5643514five period of Gastrodia elata6.760
SRR5643515five period of Gastrodia elata12.410
SRR5643524five period of Gastrodia elata10.190
SRR5643525five period of Gastrodia elata12.110
SRR5643528five period of Gastrodia elata7.910
SRR5643658five period of Gastrodia elata15.440
SRR5643659five period of Gastrodia elata14.830
SRR5643660five period of Gastrodia elata13.570
SRR5643661five period of Gastrodia elata12.000
SRR5643662five period of Gastrodia elata10.850
SRR5643663five period of Gastrodia elata12.660
SRR5643664five period of Gastrodia elata11.770
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_110.530
SRR6049655Rhizomagastrodiae_C368-T10_good_15.520
SRR6049656Rhizomagastrodiae_C368-T07_good_16.550
SRR6049657Rhizomagastrodiae_C368-T07_good_112.430
SRR6049658Rhizomagastrodiae_C368-T04_good_110.090
SRR6049659Rhizomagastrodiae_C368-T04_good_113.330
SRR6049660Rhizomagastrodiae_C368-T01_good_111.430
SRR6049661Rhizomagastrodiae_C368-T04_good_110.240
SRR6049662Rhizomagastrodiae_C368-T01_good_16.900
SRR6049663Rhizomagastrodiae_C368-T01_good_17.950
SRR6049664Rhizomagastrodiae_C368-T10_good_17.550
SRR6049665Rhizomagastrodiae_C368-T10_good_17.550
SRP279888GastroGastrodia elata tuber 11.29
JuvenJuvenile tuber14.33
Mother_GastroMother tuber of Gastrodia elata 6.28
Mother_JuvenMother tuber of Juvenile 11.55