Detail information of GWHGAAEX013608/evm.TU.scaffold_50.237


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743884387|ref|XP_010909671.1|1.10E-39PREDICTED: uncharacterized protein LOC105035706 [Elaeis guineensis]
Swissprottr|P33083|AX6B_SOYBN1.00E-09Auxin-induced protein 6B
trEMBLtr|M0T8K3|M0T8K3_MUSAM9.00E-39Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P20050_001}
TAIRAT1G561501.00E-33SAUR-like auxin-responsive protein family

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005352277365228702-
Transcript Sequence

Network for GWHGAAEX013608

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module13

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02519.13Auxin_inducible20903.90E-24
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K14488SAUR Plant hormone signal transduction map04075

Gene Ontology

GO term OntologyName
GO:0009733Biological Processresponse to auxin

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms20.230
SRR2545915Juvenile tuber14.080
SRP108465SRR5643513five period of Gastrodia elata26.050
SRR5643514five period of Gastrodia elata11.000
SRR5643515five period of Gastrodia elata36.440
SRR5643524five period of Gastrodia elata17.770
SRR5643525five period of Gastrodia elata16.690
SRR5643528five period of Gastrodia elata7.800
SRR5643658five period of Gastrodia elata8.240
SRR5643659five period of Gastrodia elata39.250
SRR5643660five period of Gastrodia elata15.830
SRR5643661five period of Gastrodia elata50.210
SRR5643662five period of Gastrodia elata51.580
SRR5643663five period of Gastrodia elata24.920
SRR5643664five period of Gastrodia elata82.340
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_150.460
SRR6049655Rhizomagastrodiae_C368-T10_good_137.010
SRR6049656Rhizomagastrodiae_C368-T07_good_148.410
SRR6049657Rhizomagastrodiae_C368-T07_good_150.990
SRR6049658Rhizomagastrodiae_C368-T04_good_154.410
SRR6049659Rhizomagastrodiae_C368-T04_good_167.290
SRR6049660Rhizomagastrodiae_C368-T01_good_172.750
SRR6049661Rhizomagastrodiae_C368-T04_good_154.560
SRR6049662Rhizomagastrodiae_C368-T01_good_125.630
SRR6049663Rhizomagastrodiae_C368-T01_good_141.090
SRR6049664Rhizomagastrodiae_C368-T10_good_128.270
SRR6049665Rhizomagastrodiae_C368-T10_good_128.270
SRP279888GastroGastrodia elata tuber 9.95
JuvenJuvenile tuber1.99
Mother_GastroMother tuber of Gastrodia elata 30.73
Mother_JuvenMother tuber of Juvenile 6.94