Detail information of GWHGAAEX013610/evm.TU.scaffold_50.241


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|338176395|ref|YP_004653205.1|6.00E-06hypothetical protein PUV_24010 [Parachlamydia acanthamoebae UV-7]
nrgi|672204641|ref|XP_008778966.1|2.15E-94PREDICTED: putative germin-like protein 2-1 [Phoenix dactylifera]
Swissprottr|Q6K5Q0|GL21_ORYSJ2.00E-89Putative germin-like protein 2-1 (Precursor)
trEMBLtr|A0A0A0KP70|A0A0A0KP70_CUCSA4.00E-94Uncharacterized protein {ECO:0000313|EMBL:KGN49476.1}
TAIRAT4G146301.00E-84germin-like protein 9

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005354174545418820+
Transcript Sequence

Network for GWHGAAEX013610

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00190.21Cupin_1672111.20E-47
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0045735Molecular Functionnutrient reservoir activity
GO:0030145Molecular Functionmanganese ion binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms3978.510
SRR2545915Juvenile tuber18514.500
SRP108465SRR5643513five period of Gastrodia elata4608.290
SRR5643514five period of Gastrodia elata5253.110
SRR5643515five period of Gastrodia elata5121.650
SRR5643524five period of Gastrodia elata7013.150
SRR5643525five period of Gastrodia elata2165.910
SRR5643528five period of Gastrodia elata402.070
SRR5643658five period of Gastrodia elata2360.940
SRR5643659five period of Gastrodia elata3999.060
SRR5643660five period of Gastrodia elata3323.220
SRR5643661five period of Gastrodia elata4970.710
SRR5643662five period of Gastrodia elata1260.290
SRR5643663five period of Gastrodia elata2136.090
SRR5643664five period of Gastrodia elata1230.070
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_14073.280
SRR6049655Rhizomagastrodiae_C368-T10_good_12491.050
SRR6049656Rhizomagastrodiae_C368-T07_good_12896.760
SRR6049657Rhizomagastrodiae_C368-T07_good_13075.210
SRR6049658Rhizomagastrodiae_C368-T04_good_12062.080
SRR6049659Rhizomagastrodiae_C368-T04_good_11532.880
SRR6049660Rhizomagastrodiae_C368-T01_good_11640.180
SRR6049661Rhizomagastrodiae_C368-T04_good_12725.460
SRR6049662Rhizomagastrodiae_C368-T01_good_11555.040
SRR6049663Rhizomagastrodiae_C368-T01_good_11399.330
SRR6049664Rhizomagastrodiae_C368-T10_good_12416.850
SRR6049665Rhizomagastrodiae_C368-T10_good_12416.850
SRP279888GastroGastrodia elata tuber 3,017.60
JuvenJuvenile tuber1,845.97
Mother_GastroMother tuber of Gastrodia elata 21,078.53
Mother_JuvenMother tuber of Juvenile 26,019.13