Detail information of GWHGAAEX013612/evm.TU.scaffold_50.243


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672204641|ref|XP_008778966.1|3.28E-36PREDICTED: putative germin-like protein 2-1 [Phoenix dactylifera]
Swissprottr|Q6K5Q0|GL21_ORYSJ3.00E-31Putative germin-like protein 2-1 (Precursor)
trEMBLtr|B9GH06|B9GH06_POPTR2.00E-33Germin-like protein 1 {ECO:0000313|EMBL:EEE83852.1}
TAIRAT5G391102.00E-28RmlC-like cupins superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005354973645498668+
Transcript Sequence

Network for GWHGAAEX013612

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00190.21Cupin_1691205.70E-11
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0045735Molecular Functionnutrient reservoir activity
GO:0030145Molecular Functionmanganese ion binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.340
SRR2545915Juvenile tuber6.530
SRP108465SRR5643513five period of Gastrodia elata3.930
SRR5643514five period of Gastrodia elata4.970
SRR5643515five period of Gastrodia elata3.530
SRR5643524five period of Gastrodia elata6.850
SRR5643525five period of Gastrodia elata5.520
SRR5643528five period of Gastrodia elata0.870
SRR5643658five period of Gastrodia elata2.440
SRR5643659five period of Gastrodia elata3.670
SRR5643660five period of Gastrodia elata2.420
SRR5643661five period of Gastrodia elata5.110
SRR5643662five period of Gastrodia elata1.400
SRR5643663five period of Gastrodia elata1.410
SRR5643664five period of Gastrodia elata0.650
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_11.690
SRR6049655Rhizomagastrodiae_C368-T10_good_15.100
SRR6049656Rhizomagastrodiae_C368-T07_good_11.190
SRR6049657Rhizomagastrodiae_C368-T07_good_11.230
SRR6049658Rhizomagastrodiae_C368-T04_good_10.000
SRR6049659Rhizomagastrodiae_C368-T04_good_10.000
SRR6049660Rhizomagastrodiae_C368-T01_good_10.530
SRR6049661Rhizomagastrodiae_C368-T04_good_10.000
SRR6049662Rhizomagastrodiae_C368-T01_good_10.290
SRR6049663Rhizomagastrodiae_C368-T01_good_10.000
SRR6049664Rhizomagastrodiae_C368-T10_good_13.000
SRR6049665Rhizomagastrodiae_C368-T10_good_13.000
SRP279888GastroGastrodia elata tuber 0.57
JuvenJuvenile tuber0.49
Mother_GastroMother tuber of Gastrodia elata 4.97
Mother_JuvenMother tuber of Juvenile 2.56