Detail information of GWHGAAEX013613/evm.TU.scaffold_50.244


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672204641|ref|XP_008778966.1|2.07E-90PREDICTED: putative germin-like protein 2-1 [Phoenix dactylifera]
Swissprottr|Q6K5Q0|GL21_ORYSJ3.00E-92Putative germin-like protein 2-1 (Precursor)
trEMBLtr|A2X4Z8|A2X4Z8_ORYSI2.00E-90Putative uncharacterized protein {ECO:0000313|EMBL:EAY85908.1}
TAIRAT5G391904.00E-78germin-like protein 2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005355393935540160+
Transcript Sequence

Network for GWHGAAEX013613

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00190.21Cupin_1672136.90E-45
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0045735Molecular Functionnutrient reservoir activity
GO:0030145Molecular Functionmanganese ion binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1.390
SRR2545915Juvenile tuber5.160
SRP108465SRR5643513five period of Gastrodia elata7.130
SRR5643514five period of Gastrodia elata6.520
SRR5643515five period of Gastrodia elata20.330
SRR5643524five period of Gastrodia elata11.560
SRR5643525five period of Gastrodia elata1.090
SRR5643528five period of Gastrodia elata1.080
SRR5643658five period of Gastrodia elata0.350
SRR5643659five period of Gastrodia elata2.340
SRR5643660five period of Gastrodia elata1.760
SRR5643661five period of Gastrodia elata2.330
SRR5643662five period of Gastrodia elata4.910
SRR5643663five period of Gastrodia elata1.340
SRR5643664five period of Gastrodia elata0.500
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_116.230
SRR6049655Rhizomagastrodiae_C368-T10_good_121.070
SRR6049656Rhizomagastrodiae_C368-T07_good_112.570
SRR6049657Rhizomagastrodiae_C368-T07_good_19.120
SRR6049658Rhizomagastrodiae_C368-T04_good_129.840
SRR6049659Rhizomagastrodiae_C368-T04_good_112.250
SRR6049660Rhizomagastrodiae_C368-T01_good_146.920
SRR6049661Rhizomagastrodiae_C368-T04_good_114.590
SRR6049662Rhizomagastrodiae_C368-T01_good_124.480
SRR6049663Rhizomagastrodiae_C368-T01_good_173.010
SRR6049664Rhizomagastrodiae_C368-T10_good_115.180
SRR6049665Rhizomagastrodiae_C368-T10_good_115.180
SRP279888GastroGastrodia elata tuber 6.80
JuvenJuvenile tuber0.09
Mother_GastroMother tuber of Gastrodia elata 358.31
Mother_JuvenMother tuber of Juvenile 12.03