Detail information of GWHGAAEX013621/evm.TU.scaffold_51.8


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|311104117|ref|YP_003976970.1|4.00E-112phosphoribosylformylglycinamidine cyclo-ligase [Achromobacter xylosoxidans A8]
KOGKOG02372.00E-170Glycinamide ribonucleotide synthetase (GARS)/Aminoimidazole ribonucleotide synthetase (AIRS)
nrgi|672197115|ref|XP_008776989.1|0PREDICTED: phosphoribosylformylglycinamidine cyclo-ligase, chloroplastic/mitochondrial [Phoenix dactylifera]
Swissprottr|P52424|PUR5_VIGUN2.00E-180Phosphoribosylformylglycinamidine cyclo-ligase, chloroplastic/mitochondrial (Precursor)
trEMBLtr|A0A067JWB5|A0A067JWB5_JATCU0Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|RuleBase:RU004370}
TAIRAT3G550102.00E-170phosphoribosylformylglycinamidine cyclo-ligase, chloroplast / phosphoribosyl-aminoimidazole synthetase / AIR synthase (PUR5)

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000057283915294601-
Transcript Sequence

Network for GWHGAAEX013621

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00586.23AIRS1052126.80E-14
PF02769.21AIRS_C2243884.40E-32
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01933purM Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Biosynthesis of antibioticsmap01130
Purine metabolismmap00230

Gene Ontology

GO term OntologyName
GO:0006189Biological Process'de novo' IMP biosynthetic process
GO:0004641Molecular Functionphosphoribosylformylglycinamidine cyclo-ligase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms38.860
SRR2545915Juvenile tuber68.340
SRP108465SRR5643513five period of Gastrodia elata75.800
SRR5643514five period of Gastrodia elata81.110
SRR5643515five period of Gastrodia elata74.240
SRR5643524five period of Gastrodia elata76.210
SRR5643525five period of Gastrodia elata48.550
SRR5643528five period of Gastrodia elata45.480
SRR5643658five period of Gastrodia elata40.210
SRR5643659five period of Gastrodia elata94.700
SRR5643660five period of Gastrodia elata87.730
SRR5643661five period of Gastrodia elata89.930
SRR5643662five period of Gastrodia elata82.560
SRR5643663five period of Gastrodia elata90.740
SRR5643664five period of Gastrodia elata76.440
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_169.020
SRR6049655Rhizomagastrodiae_C368-T10_good_146.770
SRR6049656Rhizomagastrodiae_C368-T07_good_174.210
SRR6049657Rhizomagastrodiae_C368-T07_good_167.620
SRR6049658Rhizomagastrodiae_C368-T04_good_155.590
SRR6049659Rhizomagastrodiae_C368-T04_good_148.100
SRR6049660Rhizomagastrodiae_C368-T01_good_163.590
SRR6049661Rhizomagastrodiae_C368-T04_good_158.310
SRR6049662Rhizomagastrodiae_C368-T01_good_179.540
SRR6049663Rhizomagastrodiae_C368-T01_good_169.410
SRR6049664Rhizomagastrodiae_C368-T10_good_181.450
SRR6049665Rhizomagastrodiae_C368-T10_good_181.450
SRP279888GastroGastrodia elata tuber 85.66
JuvenJuvenile tuber109.10
Mother_GastroMother tuber of Gastrodia elata 54.30
Mother_JuvenMother tuber of Juvenile 68.76