Detail information of GWHGAAEX013623/evm.TU.scaffold_51.11


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|18976583|ref|NP_577940.1|4.00E-35hypothetical protein PF0211 [Pyrococcus furiosus DSM 3638]
KOGKOG34204.00E-39Predicted RNA methylase
nrgi|719993970|ref|XP_010254037.1|7.24E-98PREDICTED: methyltransferase-like protein 5 [Nelumbo nucifera]
trEMBLtr|I1J7Z4|I1J7Z4_SOYBN4.00E-97Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G34690.1}
TAIR72938114.00E-39Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000057362913399059-
Transcript Sequence

Network for GWHGAAEX013623

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF05175.13MTS441291.50E-13
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0032259Biological Processmethylation
GO:0008168Molecular Functionmethyltransferase activity
GO:0003676Molecular Functionnucleic acid binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms10.520
SRR2545915Juvenile tuber10.260
SRP108465SRR5643513five period of Gastrodia elata14.130
SRR5643514five period of Gastrodia elata15.320
SRR5643515five period of Gastrodia elata11.010
SRR5643524five period of Gastrodia elata13.790
SRR5643525five period of Gastrodia elata12.730
SRR5643528five period of Gastrodia elata11.320
SRR5643658five period of Gastrodia elata9.990
SRR5643659five period of Gastrodia elata17.210
SRR5643660five period of Gastrodia elata17.950
SRR5643661five period of Gastrodia elata18.750
SRR5643662five period of Gastrodia elata15.430
SRR5643663five period of Gastrodia elata16.630
SRR5643664five period of Gastrodia elata14.240
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_110.330
SRR6049655Rhizomagastrodiae_C368-T10_good_17.190
SRR6049656Rhizomagastrodiae_C368-T07_good_112.440
SRR6049657Rhizomagastrodiae_C368-T07_good_19.920
SRR6049658Rhizomagastrodiae_C368-T04_good_110.410
SRR6049659Rhizomagastrodiae_C368-T04_good_111.960
SRR6049660Rhizomagastrodiae_C368-T01_good_111.830
SRR6049661Rhizomagastrodiae_C368-T04_good_114.900
SRR6049662Rhizomagastrodiae_C368-T01_good_112.550
SRR6049663Rhizomagastrodiae_C368-T01_good_115.340
SRR6049664Rhizomagastrodiae_C368-T10_good_115.100
SRR6049665Rhizomagastrodiae_C368-T10_good_115.100
SRP279888GastroGastrodia elata tuber 16.47
JuvenJuvenile tuber12.70
Mother_GastroMother tuber of Gastrodia elata 11.75
Mother_JuvenMother tuber of Juvenile 9.18